Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G059100 Prunus persica HOM05D000003 ORTHO05D000126 1.3e-99 366.3 174 100.0
FvH4_3g22921 Fragaria vesca HOM05D000003 ORTHO05D000126 2.0e-12 76.6 197 26.4
FvH4_5g37180 Fragaria vesca HOM05D000003 ORTHO05D011454 2.7e-12 76.3 189 27.0
FvH4_3g05891 Fragaria vesca HOM05D000003 ORTHO05D000126 3.3e-10 69.3 138 29.0
Lj4C893T10 Lonicera japonica HOM05D000003 ORTHO05D000126 9.5e-10 67.8 102 34.3
Atru.chr13.697 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-08 64.3 116 27.6
Atru.chr13.2083 Acer truncatum HOM05D000003 ORTHO05D000006 3.1e-08 62.8 102 34.3
TWI34G0137 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 3.1e-08 62.8 99 37.4
Atru.chr12.856 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-08 62.0 99 31.3
Prupe.7G053800 Prunus persica HOM05D000003 ORTHO05D000126 5.2e-08 62.0 136 33.1
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 6.8e-08 61.6 102 31.4
TWI38G1337 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 8.9e-08 61.2 99 36.4
Atru.chr13.2021 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-07 60.8 125 24.8
Atru.chr2.2359 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-07 60.8 108 33.3
Lj9C38T11 Lonicera japonica HOM05D000003 ORTHO05D000126 1.2e-07 60.8 96 33.3
Sed0003755 Sechium edule HOM05D000003 ORTHO05D000126 1.2e-07 60.8 102 32.4
Sed0014562 Sechium edule HOM05D000003 ORTHO05D000126 1.2e-07 60.8 102 33.3
Sed0016457 Sechium edule HOM05D000003 ORTHO05D000126 1.2e-07 60.8 102 32.4
Sed0019411 Sechium edule HOM05D000003 ORTHO05D000126 1.2e-07 60.8 102 32.4
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 1.5e-07 60.5 120 27.5
Atru.chr9.912 Acer truncatum HOM05D000003 ORTHO05D000126 1.5e-07 60.5 84 42.9
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 1.5e-07 60.5 108 32.4
Atru.chr3.2526 Acer truncatum HOM05D000003 ORTHO05D000126 2.0e-07 60.1 108 32.4
Atru.chr1.2555 Acer truncatum HOM05D000003 ORTHO05D000126 2.6e-07 59.7 108 27.8
Atru.chr11.2021 Acer truncatum HOM05D000003 ORTHO05D000126 2.6e-07 59.7 121 31.4
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 2.6e-07 59.7 108 29.6
Atru.chr11.833 Acer truncatum HOM05D000003 ORTHO05D000126 3.4e-07 59.3 106 34.9
TWI38G2069 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 3.4e-07 59.3 99 33.3
Atru.chr9.710 Acer truncatum HOM05D000003 ORTHO05D000126 4.4e-07 58.9 108 32.4
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.4e-07 58.9 107 32.7
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 4.4e-07 58.9 116 30.2
Atru.chr12.2219 Acer truncatum HOM05D000003 ORTHO05D000126 5.8e-07 58.5 106 34.0
Atru.chr6.1085 Acer truncatum HOM05D000003 ORTHO05D000126 5.8e-07 58.5 126 27.8
Atru.chr6.1097 Acer truncatum HOM05D000003 ORTHO05D000126 5.8e-07 58.5 126 27.8
Atru.chr10.111 Acer truncatum HOM05D000003 ORTHO05D000126 7.5e-07 58.2 124 29.0
Atru.chr10.94 Acer truncatum HOM05D000003 ORTHO05D000126 7.5e-07 58.2 124 29.0
FvH4_1g25603 Fragaria vesca HOM05D000003 ORTHO05D015112 7.5e-07 58.2 117 29.9
Atru.chr11.854 Acer truncatum HOM05D000003 ORTHO05D000126 9.8e-07 57.8 129 30.2
Atru.chr4.991 Acer truncatum HOM05D000003 ORTHO05D000126 9.8e-07 57.8 128 27.3
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 9.8e-07 57.8 100 30.0
CSS0015504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 9.8e-07 57.8 114 29.8
FvH4_1g25612 Fragaria vesca HOM05D000003 ORTHO05D000126 9.8e-07 57.8 183 24.6
Lj7A3G14 Lonicera japonica HOM05D000003 ORTHO05D000126 1.3e-06 57.4 80 42.5
CSS0018636 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.7e-06 57.0 107 29.9
CSS0049896 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.7e-06 57.0 110 29.1
QL04p009995 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-06 57.0 111 31.5
COL.COLO4_34268 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.2e-06 56.6 104 33.7
FvH4_2g13120 Fragaria vesca HOM05D000003 ORTHO05D000126 2.9e-06 56.2 133 29.3
Prupe.3G196300 Prunus persica HOM05D000003 ORTHO05D000126 2.9e-06 56.2 106 32.1
Atru.chr11.1277 Acer truncatum HOM05D000003 ORTHO05D000126 3.7e-06 55.8 108 31.5
Atru.chr6.705 Acer truncatum HOM05D000003 ORTHO05D000126 3.7e-06 55.8 110 30.9
CSS0004935 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.7e-06 55.8 107 29.9
CSS0016982 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.7e-06 55.8 107 29.9
FAN11G0664 Fragaria x ananassa HOM05D000003 ORTHO05D000126 3.7e-06 55.8 108 31.5
Atru.chr12.2030 Acer truncatum HOM05D000003 ORTHO05D000126 4.9e-06 55.5 90 34.4
Atru.chr13.2168 Acer truncatum HOM05D000003 ORTHO05D000126 4.9e-06 55.5 116 26.7
CSS0041731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.9e-06 55.5 129 27.1
Sed0011046 Sechium edule HOM05D000003 ORTHO05D000126 4.9e-06 55.5 87 37.9
Sed0013131 Sechium edule HOM05D015416 ORTHO05D023128 4.9e-06 55.5 95 31.6
Atru.chr4.1955 Acer truncatum HOM05D000003 ORTHO05D000126 6.4e-06 55.1 96 32.3
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 6.4e-06 55.1 96 29.2
COL.COLO4_33689 Corchorus olitorius HOM05D000003 ORTHO05D000126 6.4e-06 55.1 136 30.1
Lj6C513G2 Lonicera japonica HOM05D000003 ORTHO05D000126 6.4e-06 55.1 98 30.6
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 8.3e-06 54.7 107 24.3
COL.COLO4_28522 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.3e-06 54.7 126 27.8


User provided reference genes

Program Settings