Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 1.9e-131 472.6 255 100.0
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 3.4e-125 451.8 256 95.7
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 1.7e-92 343.2 252 75.0
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 4.8e-79 298.5 248 66.9
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 1.0e-76 290.8 247 66.0
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.8e-76 288.9 247 65.6
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 2.5e-75 286.2 247 65.2
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 4.5e-69 265.4 245 62.0
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 1.5e-67 260.4 251 59.0
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 4.7e-66 255.4 226 61.1
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 1.4e-65 253.8 225 62.2
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 1.5e-64 250.4 226 60.6
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 1.5e-64 250.4 226 63.3
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 2.6e-64 249.6 226 60.2
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 4.4e-64 248.8 228 62.7
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 7.5e-64 248.1 242 57.4
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.9e-62 243.4 247 59.1
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 9.2e-62 241.1 223 59.6
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 4.6e-61 238.8 226 60.2
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 8.6e-60 234.6 227 55.9
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 1.5e-59 233.8 250 55.2
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.5e-59 233.8 254 54.3
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 1.5e-59 233.8 226 57.5
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 5.6e-59 231.9 229 59.0
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.2e-58 230.7 255 54.9
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 1.1e-57 227.6 226 55.3
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.8e-57 226.9 250 53.2
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.3e-57 226.5 229 59.0
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 4.0e-57 225.7 228 55.3
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 5.8e-56 221.9 226 56.2
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 7.5e-56 221.5 245 51.8
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 2.9e-55 219.5 218 57.8
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.7e-53 213.0 229 51.5
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 2.7e-53 213.0 194 59.3
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 3.5e-53 212.6 181 61.3
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 1.3e-52 210.7 226 53.5
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 5.1e-52 208.8 223 52.0
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 6.6e-52 208.4 226 52.7
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 1.1e-51 207.6 245 50.6
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 1.9e-51 206.8 224 53.1
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 3.1e-49 199.5 225 51.6
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 3.4e-48 196.1 149 69.8
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 6.4e-47 191.8 229 49.3
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 8.3e-47 191.4 227 48.0
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 1.9e-46 190.3 227 46.7
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 2.4e-46 189.9 227 46.7
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 9.2e-46 188.0 208 49.0
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 2.1e-45 186.8 226 46.9
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 2.1e-45 186.8 226 46.9
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 2.7e-45 186.4 228 47.4
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 1.7e-44 183.7 183 56.8
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 2.3e-44 183.3 229 47.2
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 3.0e-44 183.0 226 46.9
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 3.0e-44 183.0 216 50.0
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 3.9e-44 182.6 227 44.9
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 4.3e-43 179.1 219 47.9
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 1.2e-40 171.0 168 57.7
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 7.6e-40 168.3 170 54.7
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 4.2e-38 162.5 196 48.5
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 4.8e-34 149.1 178 46.1
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.0e-33 146.0 202 40.1
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 9.0e-33 144.8 168 54.2
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 1.3e-31 141.0 120 62.5
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 5.6e-27 125.6 239 33.5
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 5.4e-22 109.0 108 51.9
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 1.0e-20 104.8 89 60.7
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 3.9e-20 102.8 204 33.3
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 6.2e-18 95.5 140 44.3
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 6.9e-17 92.0 65 72.3
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 1.5e-16 90.9 188 29.8
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.9e-14 84.0 198 31.8
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 3.5e-13 79.7 211 27.5
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 4.6e-13 79.3 208 27.4
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.8e-12 77.4 55 70.9
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.8e-12 77.4 177 31.1
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 8.7e-12 75.1 121 35.5
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 1.6e-10 70.9 103 39.8
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.4e-09 67.0 53 64.2
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.4e-09 67.0 123 33.3


User provided reference genes

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