Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 4.8e-94 347.8 174 100.0
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 2.2e-62 242.7 169 74.6
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 5.0e-51 204.9 157 68.8
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 1.1e-50 203.8 154 69.5
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.5e-50 202.6 153 68.6
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.2e-50 201.8 154 69.5
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 5.5e-50 201.4 154 68.8
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 2.5e-42 176.0 164 57.3
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 2.0e-39 166.4 166 58.4
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 8.2e-38 161.0 134 62.7
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 1.1e-37 160.6 163 54.0
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 2.7e-36 156.0 169 55.6
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 2.7e-36 156.0 166 56.6
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 4.5e-36 155.2 173 52.6
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.7e-35 153.3 170 54.7
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 2.2e-35 152.9 166 54.2
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 5.0e-35 151.8 171 52.6
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 6.5e-35 151.4 120 66.7
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 8.5e-35 151.0 88 80.7
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.1e-34 150.6 131 60.3
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 1.5e-34 150.2 112 69.6
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 1.9e-34 149.8 157 53.5
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.2e-34 148.7 102 69.6
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.2e-34 148.7 102 69.6
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 7.2e-34 147.9 166 48.8
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 9.4e-34 147.5 102 69.6
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.6e-33 146.7 172 49.4
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 2.1e-33 146.4 114 67.5
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 2.7e-33 146.0 141 54.6
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 3.6e-33 145.6 144 51.4
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 4.7e-33 145.2 159 53.5
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 8.0e-33 144.4 115 66.1
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 1.0e-32 144.1 108 66.7
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 1.4e-32 143.7 102 69.6
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 1.8e-32 143.3 102 71.6
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 1.8e-32 143.3 122 55.7
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 2.0e-31 139.8 135 55.6
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 2.0e-31 139.8 129 56.6
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 2.0e-31 139.8 130 55.4
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 2.6e-31 139.4 132 58.3
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 4.4e-31 138.7 90 71.1
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 5.7e-31 138.3 102 67.6
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 5.7e-31 138.3 104 66.3
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 7.5e-31 137.9 141 51.1
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 1.3e-30 137.1 122 59.8
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 1.7e-30 136.7 122 57.4
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 1.1e-29 134.0 156 51.3
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 1.1e-29 134.0 104 62.5
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 1.1e-29 134.0 141 54.6
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 1.4e-29 133.7 104 63.5
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 2.4e-29 132.9 126 55.6
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 3.1e-29 132.5 100 63.0
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 4.1e-29 132.1 102 62.7
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 5.4e-29 131.7 86 75.6
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 5.4e-29 131.7 78 76.9
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 5.4e-29 131.7 72 86.1
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 5.4e-29 131.7 101 63.4
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 9.1e-29 131.0 101 63.4
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 9.1e-29 131.0 163 49.1
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 2.0e-28 129.8 146 49.3
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 2.0e-28 129.8 109 59.6
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 4.5e-28 128.6 78 75.6
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 4.5e-28 128.6 78 75.6
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 5.9e-28 128.3 102 62.7
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 7.7e-28 127.9 81 72.8
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 7.7e-28 127.9 86 70.9
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 7.7e-28 127.9 123 57.7
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 1.0e-27 127.5 74 78.4
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 1.3e-27 127.1 101 61.4
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 1.3e-27 127.1 104 62.5
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 1.3e-27 127.1 106 60.4
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.3e-27 127.1 136 56.6
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 2.3e-27 126.3 72 81.9
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 2.3e-27 126.3 71 81.7
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 2.3e-27 126.3 72 81.9
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 2.9e-27 125.9 91 68.1
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 5.0e-27 125.2 114 57.9
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 1.9e-26 123.2 74 75.7
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 3.3e-26 122.5 72 80.6
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 1.6e-25 120.2 114 52.6
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 3.6e-25 119.0 76 72.4
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 1.0e-24 117.5 72 73.6
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 3.4e-23 112.5 119 53.8
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.4e-21 107.1 73 65.8
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 5.4e-21 105.1 111 49.5
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 9.2e-21 104.4 68 67.6
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 1.6e-20 103.6 65 76.9
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 1.0e-19 100.9 67 67.2
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 1.3e-19 100.5 127 44.9
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.3e-19 100.5 99 58.6
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 3.4e-15 85.9 54 74.1
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.5e-12 75.9 62 58.1
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 4.6e-12 75.5 40 85.0
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 7.8e-12 74.7 40 82.5
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 3.9e-11 72.4 40 80.0
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 1.6e-09 67.0 40 77.5
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.7e-09 65.5 42 73.8
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 4.0e-08 62.4 77 39.0
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 1.5e-07 60.5 74 37.8
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.8e-07 58.5 31 87.1
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.7e-06 57.0 31 80.6


User provided reference genes

Program Settings