Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G046600 Prunus persica HOM05D000519 ORTHO05D001210 1.0e-35 152.9 78 100.0
Prupe.2G047100 Prunus persica HOM05D000519 ORTHO05D001210 8.0e-25 116.7 62 93.5
MD02G1275000 Malus domestica HOM05D000519 ORTHO05D001210 1.5e-10 69.3 64 62.5
Phvul.011G196600 Phaseolus vulgaris HOM05D000519 ORTHO05D001210 8.0e-09 63.5 63 57.1
VMungo1127G0633 Vigna mungo HOM05D000519 ORTHO05D001210 5.2e-08 60.8 61 57.4
COL.COLO4_21327 Corchorus olitorius HOM05D000519 ORTHO05D001210 1.2e-07 59.7 34 79.4
arahy.Tifrunner.gnm1.ann1.ZL1DA1 Arachis hypogaea HOM05D000519 ORTHO05D001210 1.5e-07 59.3 60 56.7
Hma1.2p1_0233F.1_g098160 Hydrangea macrophylla HOM05D000519 ORTHO05D001210 4.4e-07 57.8 34 73.5
Thecc.10G138800 Theobroma cacao HOM05D000519 ORTHO05D001210 4.4e-07 57.8 58 55.2
FvH4_7g04180 Fragaria vesca HOM05D000519 ORTHO05D001210 5.8e-07 57.4 33 78.8
FAN01G2306 Fragaria x ananassa HOM05D000519 ORTHO05D001210 5.8e-07 57.4 33 78.8
FAN10G3534 Fragaria x ananassa HOM05D000519 ORTHO05D001210 5.8e-07 57.4 40 70.0
Duzib114G0410 Durio zibethinus HOM05D000519 ORTHO05D001210 7.5e-07 57.0 65 47.7
Potri.001G032900 Populus trichocarpa HOM05D000519 ORTHO05D001210 7.5e-07 57.0 34 76.5
SalBow3G1944 Salvia bowleyana HOM05D000519 ORTHO05D001210 9.8e-07 56.6 37 67.6
arahy.Tifrunner.gnm1.ann1.MLA72C Arachis hypogaea HOM05D000519 ORTHO05D001210 1.3e-06 56.2 61 54.1
FAN06G3149 Fragaria x ananassa HOM05D000519 ORTHO05D001210 1.3e-06 56.2 33 75.8
Sabra01G0023400 Salix brachista HOM05D000519 ORTHO05D001210 1.3e-06 56.2 34 73.5
Sabra01G0023500 Salix brachista HOM05D000519 ORTHO05D001210 1.3e-06 56.2 34 73.5
Gohir.D10G198100 Gossypium hirsutum HOM05D000519 ORTHO05D001210 1.7e-06 55.8 66 50.0
Gorai.011G221800 Gossypium raimondii HOM05D000519 ORTHO05D001210 1.7e-06 55.8 66 50.0
Gohir.A10G190300 Gossypium hirsutum HOM05D000519 ORTHO05D001210 2.9e-06 55.1 61 49.2
Cpa.g.sc228.9 Carica papaya HOM05D000519 ORTHO05D001210 3.7e-06 54.7 34 76.5
FAN03G1111 Fragaria x ananassa HOM05D000519 ORTHO05D001210 3.7e-06 54.7 34 70.6
RcHm_v2.0_Chr1g0328521 Rosa chinensis HOM05D000519 ORTHO05D001210 3.7e-06 54.7 33 75.8
Potri.003G192200 Populus trichocarpa HOM05D000519 ORTHO05D001210 4.9e-06 54.3 36 66.7
Ah.10g029850 Amaranthus hybridus HOM05D000519 ORTHO05D001210 6.4e-06 53.9 59 49.2
Duzib106G2054 Durio zibethinus HOM05D000519 ORTHO05D001210 6.4e-06 53.9 66 50.0
CSS0008725 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 8.3e-06 53.5 36 63.9
Cfa010968 Carpinus fangiana HOM05D000519 ORTHO05D001210 8.3e-06 53.5 53 54.7
Eucgr.J00085 Eucalyptus grandis HOM05D000519 ORTHO05D001210 8.3e-06 53.5 35 71.4
Glyma.13G189500 Glycine max HOM05D000519 ORTHO05D001210 8.3e-06 53.5 34 67.6
PGR044G0162 Punica granatum HOM05D000519 ORTHO05D001210 8.3e-06 53.5 34 73.5
RcHm_v2.0_Chr1g0328231 Rosa chinensis HOM05D000519 ORTHO05D001210 8.3e-06 53.5 60 55.0
Solyc01g009020.4 Solanum lycopersicum HOM05D000519 ORTHO05D001210 8.3e-06 53.5 38 63.2


User provided reference genes

Program Settings