Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G044300 Prunus persica HOM05D008133 ORTHO05D009449 1.3e-51 206.1 101 100.0
Prupe.2G216600 Prunus persica HOM05D008133 ORTHO05D009449 8.5e-19 97.1 86 52.3
Prupe.1G283700 Prunus persica HOM05D008133 ORTHO05D009449 1.1e-18 96.7 87 52.9
Prupe.7G083900 Prunus persica HOM05D008133 ORTHO05D009449 1.1e-18 96.7 86 52.3
Prupe.2G216500 Prunus persica HOM05D008133 ORTHO05D009449 4.7e-17 91.3 87 51.7
Prupe.1G524100 Prunus persica HOM05D008133 ORTHO05D009449 2.8e-14 82.0 86 50.0
FvH4_6g30670 Fragaria vesca HOM05D021529 ORTHO05D009449 1.4e-13 79.7 94 39.4
Prupe.3G143300 Prunus persica HOM05D008133 ORTHO05D009449 5.3e-13 77.8 88 45.5
Prupe.5G044600 Prunus persica HOM05D008133 ORTHO05D009449 4.5e-12 74.7 67 53.7
RcHm_v2.0_Chr2g0089441 Rosa chinensis HOM05D008133 ORTHO05D009449 1.3e-11 73.2 86 40.7
FvH4_1g23791 Fragaria vesca HOM05D008133 ORTHO05D009449 3.8e-11 71.6 87 37.9
RcHm_v2.0_Chr2g0115441 Rosa chinensis HOM05D008133 ORTHO05D009449 3.8e-11 71.6 87 35.6
FvH4_3g32402 Fragaria vesca HOM05D000002 ORTHO05D000047 4.2e-10 68.2 89 40.4
FvH4_4g06793 Fragaria vesca HOM05D000003 ORTHO05D000004 4.2e-10 68.2 87 36.8
RcHm_v2.0_Chr1g0324391 Rosa chinensis HOM05D027129 ORTHO05D022573 4.2e-10 68.2 86 41.9
FvH4_5g21021 Fragaria vesca HOM05D000003 ORTHO05D022646 5.5e-10 67.8 86 37.2
FvH4_5g35622 Fragaria vesca HOM05D000003 ORTHO05D014221 5.5e-10 67.8 66 42.4
FvH4_4g21421 Fragaria vesca HOM05D000003 ORTHO05D009449 9.4e-10 67.0 86 37.2
RcHm_v2.0_Chr6g0277111 Rosa chinensis HOM05D000003 ORTHO05D000004 9.4e-10 67.0 86 38.4
Prupe.3G190000 Prunus persica HOM05D008133 ORTHO05D009449 1.6e-09 66.2 87 34.5
FvH4_7g01171 Fragaria vesca HOM05D000003 ORTHO05D000004 2.7e-09 65.5 86 37.2
FvH4_6g07963 Fragaria vesca HOM05D008133 ORTHO05D022573 3.6e-09 65.1 89 38.2
Prupe.3G219800 Prunus persica HOM05D008133 ORTHO05D009449 3.6e-09 65.1 87 39.1
RcHm_v2.0_Chr4g0413041 Rosa chinensis HOM05D008133 ORTHO05D009449 4.7e-09 64.7 65 49.2
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 6.1e-09 64.3 89 33.7
FvH4_3g43651 Fragaria vesca HOM05D008133 ORTHO05D009449 4.0e-08 61.6 87 36.8
FvH4_4g25931 Fragaria vesca HOM05D011624 ORTHO05D014221 4.0e-08 61.6 89 32.6
FvH4_5g18751 Fragaria vesca HOM05D000003 ORTHO05D017879 5.2e-08 61.2 69 43.5
FvH4_2g34753 Fragaria vesca HOM05D000003 ORTHO05D014221 8.8e-08 60.5 64 40.6
FvH4_5g26254 Fragaria vesca HOM05D011824 ORTHO05D009449 8.8e-08 60.5 86 34.9
Prupe.8G042700 Prunus persica HOM05D000003 ORTHO05D009449 1.5e-07 59.7 85 35.3
Prupe.1G202000 Prunus persica HOM05D000003 ORTHO05D000004 2.6e-07 58.9 78 33.3
RcHm_v2.0_Chr2g0141951 Rosa chinensis HOM05D000023 ORTHO05D000014 2.6e-07 58.9 88 36.4
FvH4_4g05481 Fragaria vesca HOM05D008133 ORTHO05D009449 5.7e-07 57.8 87 34.5
COL.COLO4_12191 Corchorus olitorius HOM05D008133 ORTHO05D009449 1.3e-06 56.6 87 32.2
COL.COLO4_30109 Corchorus olitorius HOM05D008133 ORTHO05D009449 1.3e-06 56.6 87 34.5
FAN25G0953 Fragaria x ananassa HOM05D008133 ORTHO05D009449 4.8e-06 54.7 76 36.8
MD17G1165700 Malus domestica HOM05D008133 ORTHO05D009449 6.3e-06 54.3 87 33.3
RcHm_v2.0_Chr6g0249781 Rosa chinensis HOM05D000003 ORTHO05D000004 6.3e-06 54.3 81 34.6


User provided reference genes

Program Settings