Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 6.2e-70 267.3 133 100.0
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 2.9e-67 258.5 133 95.5
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 5.1e-64 247.7 133 91.0
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.8e-62 241.9 133 88.7
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.8e-62 241.9 133 88.7
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 1.1e-61 240.0 133 87.2
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 1.8e-61 239.2 133 88.0
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 9.0e-61 236.9 133 87.2
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 9.0e-61 236.9 133 87.2
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 4.6e-57 224.6 133 82.7
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 1.4e-56 223.0 131 82.4
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.3e-56 222.2 133 81.2
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 3.9e-56 221.5 131 82.4
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 3.9e-56 221.5 133 82.7
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 5.1e-56 221.1 133 80.5
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 5.1e-56 221.1 133 79.7
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 8.8e-56 220.3 133 82.7
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 2.0e-55 219.2 133 80.5
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 2.0e-55 219.2 133 79.7
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.5e-55 218.8 133 79.7
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 2.5e-55 218.8 133 81.2
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 4.3e-55 218.0 133 80.5
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.3e-55 218.0 133 80.5
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.3e-55 218.0 133 80.5
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 4.3e-55 218.0 133 79.7
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 5.7e-55 217.6 133 78.2
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 9.7e-55 216.9 133 78.9
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.8e-54 215.3 131 79.4
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 4.8e-54 214.5 131 80.2
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 1.1e-53 213.4 131 78.6
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.8e-53 212.6 133 76.7
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 2.4e-53 212.2 133 78.2
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 3.1e-53 211.8 133 76.7
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 5.3e-53 211.1 133 78.9
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 5.3e-53 211.1 133 76.7
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 6.9e-53 210.7 133 76.7
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 9.1e-53 210.3 133 76.7
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.5e-52 209.5 133 78.2
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.5e-52 209.5 133 77.4
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 1.5e-52 209.5 133 75.2
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 2.0e-52 209.1 133 75.9
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 3.4e-52 208.4 133 75.2
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 3.4e-52 208.4 133 75.9
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 4.5e-52 208.0 131 76.3
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 4.5e-52 208.0 141 73.8
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 5.9e-52 207.6 132 75.8
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 7.7e-52 207.2 131 76.3
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 2.2e-51 205.7 131 75.6
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 2.9e-51 205.3 128 77.3
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 5.0e-51 204.5 126 78.6
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 1.9e-50 202.6 131 74.8
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 1.9e-50 202.6 131 74.8
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 1.9e-50 202.6 133 73.7
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.9e-50 202.6 132 72.0
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 5.5e-50 201.1 133 73.7
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 5.5e-50 201.1 133 73.7
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 6.1e-49 197.6 131 71.8
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 6.1e-49 197.6 125 76.0
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 7.9e-49 197.2 133 70.7
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.4e-48 196.4 132 72.0
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 3.0e-48 195.3 129 73.6
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 3.9e-48 194.9 126 74.6
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 1.1e-47 193.4 131 73.3
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 1.5e-47 193.0 131 72.5
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 1.5e-47 193.0 131 70.2
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 2.6e-47 192.2 131 70.2
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 2.6e-47 192.2 125 74.4
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 3.3e-47 191.8 131 71.8
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 3.3e-47 191.8 131 71.8
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 3.3e-47 191.8 131 71.8
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 3.3e-47 191.8 131 71.8
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 4.4e-47 191.4 131 70.2
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 7.4e-47 190.7 131 70.2
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 9.7e-47 190.3 126 71.4
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.3e-46 189.9 131 70.2
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 1.3e-46 189.9 131 70.2
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 2.2e-46 189.1 131 69.5
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 2.2e-46 189.1 131 69.5
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 2.2e-46 189.1 128 68.8
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 3.7e-46 188.3 125 72.0
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 3.7e-46 188.3 134 70.1
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 4.8e-46 188.0 133 70.7
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 8.2e-46 187.2 126 73.8
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 1.1e-45 186.8 126 70.6
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 1.1e-45 186.8 129 70.5
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 1.8e-45 186.0 131 67.9
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 4.1e-45 184.9 126 72.2
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 4.1e-45 184.9 128 71.9
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 5.3e-45 184.5 127 68.5
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 9.1e-45 183.7 141 66.7
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 1.2e-44 183.3 127 67.7
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 1.2e-44 183.3 126 73.0
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 1.5e-44 183.0 140 65.7
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 1.5e-44 183.0 140 66.4
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.5e-44 183.0 158 58.9
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 2.0e-44 182.6 144 65.3
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 2.0e-44 182.6 132 66.7
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 2.6e-44 182.2 133 68.4
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 4.5e-44 181.4 140 65.0
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 4.5e-44 181.4 127 66.9
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 7.7e-44 180.6 138 65.2
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 7.7e-44 180.6 138 65.2
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.0e-43 180.3 128 70.3
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 1.3e-43 179.9 128 70.3
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 2.9e-43 178.7 128 67.2
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 8.5e-43 177.2 126 68.3
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 8.5e-43 177.2 172 55.2
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 1.1e-42 176.8 128 66.4
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 4.2e-42 174.9 128 65.6
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 3.0e-40 168.7 131 64.9
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 3.0e-40 168.7 133 64.7
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 9.1e-37 157.1 104 75.0
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 1.7e-35 152.9 131 60.3
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 2.2e-35 152.5 132 55.3
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.9e-34 149.4 131 62.6
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 2.3e-32 142.5 95 72.6
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 8.8e-32 140.6 128 55.5
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.0e-31 139.4 93 71.0
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 9.7e-31 137.1 128 53.9
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 1.4e-29 133.3 133 54.1
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 8.5e-27 124.0 62 93.5
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 1.4e-24 116.7 69 82.6
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.0e-24 115.2 75 76.0
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 5.2e-24 114.8 71 76.1
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.2e-23 113.6 62 87.1
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.2e-23 113.6 62 87.1
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.2e-23 113.6 71 77.5
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 1.2e-23 113.6 72 75.0
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 2.6e-23 112.5 62 85.5
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.4e-23 112.1 75 74.7
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 4.4e-23 111.7 76 71.1
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.8e-22 109.0 71 76.1
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 5.4e-21 104.8 72 72.2
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 5.4e-21 104.8 72 68.1
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 1.2e-20 103.6 118 42.4
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 2.7e-20 102.4 65 75.4
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 3.5e-20 102.1 77 63.6
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 5.9e-20 101.3 70 68.6
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 1.5e-15 86.7 64 65.6
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 1.7e-14 83.2 56 71.4
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 1.4e-13 80.1 77 55.8
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 7.8e-12 74.3 53 64.2
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 1.3e-11 73.6 123 33.3
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.7e-11 73.2 69 47.8
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 4.3e-10 68.6 51 64.7
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 3.1e-08 62.4 132 30.3
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 2.0e-07 59.7 58 39.7
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 5.8e-07 58.2 104 29.8
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.2e-06 56.2 53 49.1


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