Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 1.3e-168 596.3 300 100.0
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 2.1e-142 509.2 294 88.4
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 1.3e-128 463.4 300 80.0
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.3e-128 463.4 300 80.0
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 8.7e-128 460.7 297 80.1
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.5e-127 459.1 300 79.3
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 1.7e-123 446.4 301 79.7
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 1.4e-114 416.8 308 71.8
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 5.1e-112 408.3 305 69.5
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 1.5e-108 396.7 301 70.8
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 1.5e-108 396.7 294 71.1
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 1.5e-108 396.7 291 72.9
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 2.9e-107 392.5 311 68.5
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 5.0e-107 391.7 280 71.8
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 3.5e-105 385.6 257 75.5
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 6.1e-105 384.8 295 68.5
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 3.3e-103 379.0 306 67.0
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 4.3e-103 378.6 313 64.2
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 4.8e-102 375.2 302 69.5
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 1.8e-101 373.2 293 65.5
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 9.0e-101 370.9 299 66.2
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 2.0e-100 369.8 298 65.8
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 2.6e-100 369.4 302 66.6
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 5.9e-100 368.2 301 65.4
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 1.0e-99 367.5 309 63.8
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 2.2e-99 366.3 280 67.9
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.9e-98 363.2 278 68.3
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 4.2e-98 362.1 278 67.6
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 5.5e-98 361.7 258 70.9
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 9.4e-98 360.9 276 68.1
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 9.4e-98 360.9 304 63.8
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 9.4e-98 360.9 280 67.9
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.1e-97 359.8 303 64.7
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.7e-97 359.4 280 68.2
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 2.7e-97 359.4 295 64.7
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 4.6e-97 358.6 303 64.4
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 1.0e-96 357.5 280 66.8
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.3e-96 356.3 303 64.0
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 3.0e-96 355.9 308 63.3
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 8.8e-96 354.4 274 66.4
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 1.1e-95 354.0 241 74.3
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 2.0e-95 353.2 245 73.1
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 3.3e-95 352.4 250 70.8
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 7.4e-95 351.3 292 65.1
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 1.3e-94 350.5 290 64.1
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 1.3e-94 350.5 293 62.8
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.3e-94 350.5 247 69.6
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 2.8e-94 349.4 283 63.6
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 6.3e-94 348.2 301 61.1
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 8.2e-94 347.8 289 64.7
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 8.2e-94 347.8 270 66.7
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 1.1e-93 347.4 294 65.0
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.4e-93 346.3 300 63.7
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 2.4e-93 346.3 245 68.6
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 4.1e-93 345.5 299 61.2
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.0e-92 343.2 247 68.8
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 3.2e-90 335.9 269 65.1
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.2e-90 335.9 302 58.6
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 3.2e-90 335.9 299 60.5
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 6.1e-89 331.6 289 61.2
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.0e-88 330.9 247 68.0
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 1.4e-88 330.5 285 61.8
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 2.3e-88 329.7 297 59.3
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 9.7e-87 324.3 298 60.4
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 9.7e-87 324.3 258 64.7
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 2.2e-86 323.2 296 59.8
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 2.8e-86 322.8 288 58.3
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 8.2e-86 321.2 299 58.5
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 1.4e-85 320.5 281 61.9
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 3.1e-85 319.3 284 60.9
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 1.3e-83 313.9 258 61.2
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 1.1e-82 310.8 256 64.8
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 3.2e-82 309.3 286 60.5
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 5.7e-79 298.5 216 67.6
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 9.7e-79 297.7 315 53.0
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 9.1e-77 291.2 213 66.2
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 2.2e-75 286.6 296 53.0
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 7.2e-74 281.6 263 59.3
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 1.2e-57 227.6 160 70.0
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 3.6e-57 226.1 173 63.0
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 5.2e-56 222.2 205 59.0
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.9e-54 216.5 258 45.7
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 1.7e-43 180.6 164 61.0
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.3e-40 170.2 132 66.7
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.2e-39 167.9 253 40.3
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.2e-39 167.9 167 55.7
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 1.6e-36 157.5 268 36.9
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 2.7e-36 156.8 239 40.2
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 6.0e-36 155.6 119 66.4
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 7.8e-20 102.1 79 65.8
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 6.2e-17 92.4 64 65.6
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 5.3e-16 89.4 78 53.8
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 1.0e-11 75.1 70 55.7
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 2.3e-11 73.9 187 27.3


User provided reference genes

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