Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G035300 Prunus persica HOM05D003997 ORTHO05D002698 2.3e-60 235.3 116 100.0
Prupe.7G027600 Prunus persica HOM05D003997 ORTHO05D002698 5.7e-27 124.4 95 72.6
MD06G1011100 Malus domestica HOM05D003997 ORTHO05D002698 8.5e-15 84.0 97 53.6
MD03G1130200 Malus domestica HOM05D003997 ORTHO05D002698 8.0e-13 77.4 87 51.7
CiPaw.08G072600 Carya illinoinensis HOM05D003997 ORTHO05D002698 1.8e-09 66.2 84 51.2
MD14G1042400 Malus domestica HOM05D003997 ORTHO05D002698 1.8e-09 66.2 105 43.8
QL07p027111 Quercus lobata HOM05D003997 ORTHO05D002698 2.4e-09 65.9 110 38.2
QL03p055008 Quercus lobata HOM05D003997 ORTHO05D002698 3.1e-09 65.5 84 45.2
RcHm_v2.0_Chr7g0223381 Rosa chinensis HOM05D003997 ORTHO05D002698 4.1e-09 65.1 94 45.7
MD12G1043400 Malus domestica HOM05D003997 ORTHO05D002698 5.4e-09 64.7 104 43.3
Cfa020087 Carpinus fangiana HOM05D003997 ORTHO05D002698 9.1e-09 63.9 114 35.1
CiPaw.15G185300 Carya illinoinensis HOM05D003997 ORTHO05D002698 9.1e-09 63.9 114 39.5
FvH4_6g20730 Fragaria vesca HOM05D003997 ORTHO05D002698 9.1e-09 63.9 105 43.8
FAN02G0475 Fragaria x ananassa HOM05D003997 ORTHO05D002698 9.1e-09 63.9 105 43.8
GSVIVG01022501001 Vitis vinifera HOM05D003997 ORTHO05D002698 9.1e-09 63.9 82 45.1
FAN14G5955 Fragaria x ananassa HOM05D003997 ORTHO05D002698 1.2e-08 63.5 106 44.3
Manes.08G035900 Manihot esculenta HOM05D003997 ORTHO05D002698 1.6e-08 63.2 81 46.9
Prupe.7G091500 Prunus persica HOM05D003997 ORTHO05D002698 2.0e-08 62.8 108 41.7
Thecc.05G108200 Theobroma cacao HOM05D003997 ORTHO05D002698 2.0e-08 62.8 85 43.5
COL.COLO4_29520 Corchorus olitorius HOM05D003997 ORTHO05D002698 3.5e-08 62.0 89 43.8
FAN05G3201 Fragaria x ananassa HOM05D003997 ORTHO05D002698 3.5e-08 62.0 106 43.4
RcHm_v2.0_Chr3g0476631 Rosa chinensis HOM05D003997 ORTHO05D002698 7.7e-08 60.8 104 43.3
Haze_20104 Corylus avellana HOM05D003997 ORTHO05D002698 1.3e-07 60.1 114 34.2
Gohir.A01G200200 Gossypium hirsutum HOM05D003997 ORTHO05D002698 2.3e-07 59.3 86 41.9
CANSAT35G1644 Cannabis sativa HOM05D003997 ORTHO05D002698 5.0e-07 58.2 84 40.5
Dinv25067 Davidia involucrata HOM05D003997 ORTHO05D002698 5.0e-07 58.2 79 41.8
Gorai.002G234000 Gossypium raimondii HOM05D003997 ORTHO05D002698 5.0e-07 58.2 85 41.2
TWI74G0953 Tripterygium wilfordii HOM05D003997 ORTHO05D002698 5.0e-07 58.2 83 43.4
Ciclev10013709m.g Citrus clementina HOM05D003997 ORTHO05D002698 6.6e-07 57.8 84 42.9
TWI53G0181 Tripterygium wilfordii HOM05D003997 ORTHO05D002698 6.6e-07 57.8 83 43.4
Cc06_g06830 Coffea canephora HOM05D003997 ORTHO05D002698 1.5e-06 56.6 84 38.1
Thhalv10003962m.g Eutrema salsugineum HOM05D001982 ORTHO05D003938 2.5e-06 55.8 100 40.0
Atru.chr8.1304 Acer truncatum HOM05D003997 ORTHO05D002698 3.3e-06 55.5 88 42.0
AT4G28360 Arabidopsis thaliana HOM05D003997 ORTHO05D002698 3.3e-06 55.5 101 40.6
Carub.0007s1240 Capsella rubella HOM05D003997 ORTHO05D002698 3.3e-06 55.5 101 40.6
Gohir.A09G132800 Gossypium hirsutum HOM05D003997 ORTHO05D002698 3.3e-06 55.5 87 39.1
Aqoxy4G00923 Aquilegia oxysepala HOM05D003997 ORTHO05D002698 5.5e-06 54.7 74 44.6
CARHR060900 Cardamine hirsuta HOM05D003997 ORTHO05D002698 5.5e-06 54.7 102 35.3
Gohir.D01G190300 Gossypium hirsutum HOM05D003997 ORTHO05D002698 5.5e-06 54.7 85 40.0
Potri.016G067100 Populus trichocarpa HOM05D003997 ORTHO05D002698 5.5e-06 54.7 88 38.6
THA.LOC109116862 Tarenaya hassleriana HOM05D003997 ORTHO05D002698 5.5e-06 54.7 76 44.7
Cpa.g.sc17.105 Carica papaya HOM05D003997 ORTHO05D002698 9.5e-06 53.9 86 38.4


User provided reference genes

Program Settings