Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G033500 Prunus persica HOM05D000002 ORTHO05D004433 1.0e-44 183.0 87 100.0
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-25 117.5 102 59.8
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-24 116.3 102 57.8
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-24 115.2 102 57.8
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-24 114.4 102 56.9
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-24 114.0 83 66.3
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-24 114.0 102 56.9
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-24 114.0 102 57.8
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-24 114.0 91 62.6
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 7.5e-24 113.6 102 56.9
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 7.5e-24 113.6 102 56.9
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 1.3e-23 112.8 100 60.0
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-23 110.9 99 57.6
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 8.3e-23 110.2 102 54.9
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 4.1e-22 107.8 101 55.4
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-21 106.3 101 50.5
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 1.2e-21 106.3 123 49.6
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-21 106.3 102 54.9
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 3.5e-21 104.8 102 54.9
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-20 102.1 101 47.5
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-20 101.3 101 50.5
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-19 99.8 101 46.5
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-19 99.8 102 48.0
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-19 99.4 102 48.0
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-19 99.0 102 47.1
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-19 99.0 102 47.1
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-19 99.0 102 47.1
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-19 99.0 102 47.1
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-19 98.6 102 47.1
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-19 98.6 103 45.6
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 2.5e-19 98.6 88 60.2
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 9.5e-19 96.7 101 47.5
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-18 96.3 102 46.1
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-18 96.3 101 47.5
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 1.6e-18 95.9 90 55.6
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 4.7e-18 94.4 90 55.6
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 4.7e-18 94.4 90 55.6
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-17 91.7 101 43.6
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 3.1e-17 91.7 87 51.7
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 5.2e-17 90.9 82 57.3
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 6.8e-17 90.5 97 46.4
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.9e-17 90.1 94 50.0
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-15 85.9 91 49.5
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-15 85.1 102 39.2
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 2.9e-15 85.1 80 55.0
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.6e-13 79.3 96 43.8
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.5e-13 78.2 92 42.4
Gorai.012G076500 Gossypium raimondii HOM05D000002 ORTHO05D004433 6.0e-13 77.4 74 52.7
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.0e-13 77.4 80 45.0
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 7.8e-13 77.0 92 42.4
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 7.8e-13 77.0 92 42.4
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.7e-12 75.9 92 41.3
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-12 75.5 92 45.7
SHI39435 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-12 75.5 42 73.8
SHI39437 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-12 75.5 42 73.8
SHI47496 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-12 75.5 42 73.8
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.9e-12 74.7 92 41.3
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 3.9e-12 74.7 42 69.0
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 3.9e-12 74.7 94 40.4
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-12 74.3 41 70.7
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-11 73.2 39 71.8
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-11 72.8 78 52.6
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.9e-11 72.4 90 41.1
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.5e-11 72.0 91 39.6
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-11 70.9 75 52.0
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-11 70.5 78 51.3
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.6e-11 70.1 93 38.7
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-10 68.9 36 75.0
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.8e-10 68.6 93 37.6
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.0e-09 64.7 92 35.9
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.0e-09 64.7 78 44.9
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.3e-09 64.3 92 35.9
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 9.0e-09 63.5 77 44.2
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 1.5e-08 62.8 75 46.7
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 1.5e-08 62.8 90 33.3
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 2.0e-08 62.4 74 47.3
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 2.6e-08 62.0 95 34.7
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 2.6e-08 62.0 93 33.3
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 2.6e-08 62.0 95 33.7
Glyma.01G070601 Glycine max HOM05D000002 ORTHO05D004433 4.4e-08 61.2 96 32.3
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.4e-08 61.2 92 35.9
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.4e-08 61.2 80 37.5
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.8e-08 60.8 94 31.9
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 7.6e-08 60.5 94 35.1
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 7.6e-08 60.5 75 46.7
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 7.6e-08 60.5 95 34.7
Gohir.D08G274150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 9.9e-08 60.1 90 35.6
Gorai.004G292700 Gossypium raimondii HOM05D000002 ORTHO05D004433 9.9e-08 60.1 90 35.6
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.3e-07 59.7 94 31.9
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 2.2e-07 58.9 75 49.3
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 2.2e-07 58.9 75 45.3
Nn8g39618 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.8e-07 58.2 77 42.9
PGR044G1025 Punica granatum HOM05D000097 ORTHO05D000041 3.8e-07 58.2 90 35.6
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 3.8e-07 58.2 34 64.7
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 4.9e-07 57.8 75 45.3
PGR044G1072 Punica granatum HOM05D000097 ORTHO05D000041 4.9e-07 57.8 34 67.6
PGR044G0355 Punica granatum HOM05D000097 ORTHO05D000041 1.1e-06 56.6 34 67.6
PGR044G1153 Punica granatum HOM05D000097 ORTHO05D000041 1.1e-06 56.6 34 67.6
SHI22389 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-06 56.6 80 42.5
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-06 56.6 96 34.4
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 1.4e-06 56.2 100 32.0
PGR044G2365 Punica granatum HOM05D000097 ORTHO05D000041 2.4e-06 55.5 99 33.3
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 2.4e-06 55.5 95 35.8
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.2e-06 54.7 75 33.3
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 4.2e-06 54.7 75 41.3


User provided reference genes

Program Settings