Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G026100 Prunus persica HOM05D000003 ORTHO05D000126 1.4e-62 242.7 114 100.0
Prupe.7G035300 Prunus persica HOM05D000003 ORTHO05D000126 1.6e-34 149.4 85 80.0
Prupe.3G153700 Prunus persica HOM05D000003 ORTHO05D000126 8.4e-15 84.0 104 37.5
QL01p055473 Quercus lobata HOM05D000003 ORTHO05D000126 1.4e-09 66.6 80 40.0
RcHm_v2.0_Chr3g0468751 Rosa chinensis HOM05D000003 ORTHO05D000126 1.4e-09 66.6 58 48.3
Atru.chr7.382 Acer truncatum HOM05D000003 ORTHO05D000126 1.8e-09 66.2 82 40.2
FvH4_1g27352 Fragaria vesca HOM05D038014 ORTHO05D000126 2.4e-09 65.9 107 30.8
Atru.chr3.3485 Acer truncatum HOM05D000003 ORTHO05D000126 6.9e-09 64.3 78 41.0
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-08 63.5 88 38.6
CANSAT54G0252 Cannabis sativa HOM05D000003 ORTHO05D000126 2.0e-08 62.8 88 36.4
QL08p015789 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-08 62.8 81 38.3
Atru.chr12.856 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-08 62.4 79 39.2
Rhsim10G0112300 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.6e-08 62.4 76 38.2
QL04p062130 Quercus lobata HOM05D000003 ORTHO05D000126 3.4e-08 62.0 77 39.0
Atru.chr4.1955 Acer truncatum HOM05D000003 ORTHO05D000126 4.5e-08 61.6 79 38.0
Atru.chr3.1852 Acer truncatum HOM05D000003 ORTHO05D000126 5.8e-08 61.2 88 38.6
QL06p037254 Quercus lobata HOM05D000003 ORTHO05D000126 5.8e-08 61.2 90 36.7
Sed0014562 Sechium edule HOM05D000003 ORTHO05D000126 5.8e-08 61.2 87 36.8
Hma1.2p1_0145F.1_g065260 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 7.6e-08 60.8 76 38.2
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-08 60.8 87 40.2
QL11p049571 Quercus lobata HOM05D000003 ORTHO05D000126 7.6e-08 60.8 83 37.3
Atru.chr1.1793 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-07 60.1 77 39.0
Hma1.2p1_1456F.1_g284630 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 1.3e-07 60.1 83 36.1
QL05p083215 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-07 60.1 91 35.2
QL08p015746 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-07 60.1 103 31.1
QL03p031860 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-07 59.7 81 37.0
Rhsim10G0077300 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.7e-07 59.7 81 32.1
QL09p054237 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-07 59.3 78 38.5
Atru.chr8.822 Acer truncatum HOM05D000003 ORTHO05D000167 2.9e-07 58.9 77 36.4
Atru.chr3.2526 Acer truncatum HOM05D000003 ORTHO05D000126 3.8e-07 58.5 80 37.5
Atru.chr9.913 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-07 58.5 82 35.4
COL.COLO4_27234 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.8e-07 58.5 83 38.6
Atru.chr3.1004 Acer truncatum HOM05D000003 ORTHO05D000126 4.9e-07 58.2 73 42.5
Atru.chr9.710 Acer truncatum HOM05D000003 ORTHO05D000126 4.9e-07 58.2 79 35.4
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.9e-07 58.2 76 39.5
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.9e-07 58.2 76 39.5
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 4.9e-07 58.2 84 32.1
Prupe.2G099000 Prunus persica HOM05D000003 ORTHO05D000126 4.9e-07 58.2 90 34.4
QL04p064704 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-07 58.2 83 38.6
QL05p026561 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-07 58.2 78 39.7
QL10p031737 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-07 58.2 81 34.6
Rhsim08G0131400 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.9e-07 58.2 76 34.2
Atru.chr12.2030 Acer truncatum HOM05D000003 ORTHO05D000126 6.4e-07 57.8 77 39.0
CANSAT25G0932 Cannabis sativa HOM05D000003 ORTHO05D000004 6.4e-07 57.8 79 32.9
CANSAT64G1601 Cannabis sativa HOM05D000003 ORTHO05D000126 6.4e-07 57.8 83 32.5
QL02p054646 Quercus lobata HOM05D000003 ORTHO05D000126 6.4e-07 57.8 81 33.3
QL03p031581 Quercus lobata HOM05D000003 ORTHO05D000126 6.4e-07 57.8 81 33.3
TPR.G16107 Trifolium pratense HOM05D000003 ORTHO05D000126 6.4e-07 57.8 80 35.0
QL12p015288 Quercus lobata HOM05D000003 ORTHO05D000126 8.4e-07 57.4 76 31.6
QL93p2011_0013 Quercus lobata HOM05D000003 ORTHO05D000126 8.4e-07 57.4 76 31.6
TPR.G36487 Trifolium pratense HOM05D000003 ORTHO05D000126 8.4e-07 57.4 90 35.6
Atru.chr2.2359 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-06 57.0 77 37.7
Atru.chr8.897 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-06 57.0 84 34.5
Lj5P129T22 Lonicera japonica HOM05D000003 ORTHO05D000126 1.1e-06 57.0 83 30.1
Oeu011011.1 Olea europaea HOM05D000003 ORTHO05D000126 1.1e-06 57.0 76 36.8
Atru.chr5.1805 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-06 56.6 81 34.6
CANSAT21G1968 Cannabis sativa HOM05D000003 ORTHO05D000126 1.4e-06 56.6 81 34.6
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.4e-06 56.6 80 33.8
Atru.chr10.400 Acer truncatum HOM05D000003 ORTHO05D000007 1.9e-06 56.2 78 39.7
Atru.chr4.1290 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-06 56.2 102 29.4
COL.COLO4_12194 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.9e-06 56.2 82 36.6
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 2.4e-06 55.8 76 34.2
FvH4_2g04610 Fragaria vesca HOM05D000003 ORTHO05D000126 2.4e-06 55.8 85 28.2
Oeu013934.1 Olea europaea HOM05D000003 ORTHO05D000126 2.4e-06 55.8 89 30.3
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.4e-06 55.8 87 33.3
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 2.4e-06 55.8 82 34.1
Atru.chr6.327 Acer truncatum HOM05D000486 ORTHO05D000375 3.2e-06 55.5 77 37.7
Atru.chr9.912 Acer truncatum HOM05D000003 ORTHO05D000126 3.2e-06 55.5 85 35.3
FvH4_7g05661 Fragaria vesca HOM05D000003 ORTHO05D000126 3.2e-06 55.5 85 28.2
QL03p033500 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 55.5 77 36.4
QL11p000243 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 55.5 76 34.2
Lj3g0022651 Lotus japonicus HOM05D000003 ORTHO05D000126 4.2e-06 55.1 86 36.0
Nitab4.5_0000470g0220 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.2e-06 55.1 76 38.2
Atru.chr11.854 Acer truncatum HOM05D000003 ORTHO05D000126 5.5e-06 54.7 79 35.4
Atru.chr12.1783 Acer truncatum HOM05D000003 ORTHO05D000126 5.5e-06 54.7 68 36.8
Eucgr.H03448 Eucalyptus grandis HOM05D000003 ORTHO05D000126 5.5e-06 54.7 90 36.7
Lj7A3G14 Lonicera japonica HOM05D000003 ORTHO05D000126 5.5e-06 54.7 77 37.7
Lj3g0024247 Lotus japonicus HOM05D000003 ORTHO05D000126 5.5e-06 54.7 77 36.4
Lj5g0003062 Lotus japonicus HOM05D000003 ORTHO05D000004 5.5e-06 54.7 91 34.1
QL04p067563 Quercus lobata HOM05D000003 ORTHO05D000007 5.5e-06 54.7 76 36.8
Atru.chr12.2219 Acer truncatum HOM05D000003 ORTHO05D000126 7.1e-06 54.3 77 35.1
Atru.chr4.991 Acer truncatum HOM05D000003 ORTHO05D000126 7.1e-06 54.3 77 37.7
ClCG08G005700 Citrullus lanatus HOM05D000003 ORTHO05D000126 7.1e-06 54.3 81 37.0
Atru.chr13.697 Acer truncatum HOM05D000003 ORTHO05D000126 9.3e-06 53.9 76 32.9
Atru.chr9.654 Acer truncatum HOM05D000003 ORTHO05D000007 9.3e-06 53.9 76 36.8
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 9.3e-06 53.9 76 34.2
CANSAT01G0913 Cannabis sativa HOM05D000003 ORTHO05D000126 9.3e-06 53.9 82 32.9
COL.COLO4_25128 Corchorus olitorius HOM05D000003 ORTHO05D000126 9.3e-06 53.9 87 32.2
COL.COLO4_29195 Corchorus olitorius HOM05D000003 ORTHO05D000126 9.3e-06 53.9 105 30.5
FvH4_1g19111 Fragaria vesca HOM05D008133 ORTHO05D009449 9.3e-06 53.9 53 47.2
Lj6P401T12 Lonicera japonica HOM05D000003 ORTHO05D000126 9.3e-06 53.9 77 37.7
QL03p023077 Quercus lobata HOM05D000003 ORTHO05D000126 9.3e-06 53.9 76 32.9
QL08p037895 Quercus lobata HOM05D000003 ORTHO05D000126 9.3e-06 53.9 77 37.7
RhsimUnG0069600 Rhododendron simsii HOM05D000003 ORTHO05D000126 9.3e-06 53.9 98 28.6
RcHm_v2.0_Chr4g0401981 Rosa chinensis HOM05D000003 ORTHO05D000126 9.3e-06 53.9 82 34.1
Sed0003755 Sechium edule HOM05D000003 ORTHO05D000126 9.3e-06 53.9 81 34.6
Sed0019411 Sechium edule HOM05D000003 ORTHO05D000126 9.3e-06 53.9 81 34.6
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 9.3e-06 53.9 75 37.3


User provided reference genes

Program Settings