Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 1.9e-41 172.2 90 100.0
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 8.0e-37 156.8 88 88.6
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 1.4e-33 146.0 88 81.8
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 3.9e-31 137.9 88 76.1
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 1.9e-30 135.6 86 77.9
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 1.9e-30 135.6 89 74.2
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 1.9e-30 135.6 88 73.9
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 4.3e-30 134.4 87 77.0
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 9.5e-30 133.3 88 75.0
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 1.6e-29 132.5 88 72.7
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 1.6e-29 132.5 88 71.6
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 1.6e-29 132.5 88 71.6
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 1.6e-29 132.5 88 71.6
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 6.2e-29 130.6 88 75.0
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 6.2e-29 130.6 88 75.0
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 8.1e-29 130.2 88 73.9
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 8.1e-29 130.2 88 75.0
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 1.1e-28 129.8 88 75.0
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.1e-28 129.8 89 73.0
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.4e-28 129.4 89 73.0
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 1.8e-28 129.0 88 69.3
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 2.3e-28 128.6 88 70.5
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 2.3e-28 128.6 88 72.7
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 2.3e-28 128.6 88 70.5
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 3.1e-28 128.3 86 74.4
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 3.1e-28 128.3 86 74.4
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 3.1e-28 128.3 88 70.5
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 4.0e-28 127.9 86 73.3
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 4.0e-28 127.9 89 69.7
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 5.2e-28 127.5 89 69.7
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 6.8e-28 127.1 88 71.6
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 8.9e-28 126.7 77 80.5
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 8.9e-28 126.7 88 73.9
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 1.2e-27 126.3 87 72.4
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 1.2e-27 126.3 91 71.4
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 1.5e-27 125.9 88 71.6
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.5e-27 125.9 83 77.1
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 4.4e-27 124.4 86 69.8
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 5.8e-27 124.0 86 70.9
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 7.5e-27 123.6 84 73.8
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 7.5e-27 123.6 88 70.5
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 7.5e-27 123.6 87 69.0
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 1.7e-26 122.5 77 76.6
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 1.7e-26 122.5 77 76.6
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 2.2e-26 122.1 88 69.3
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 2.2e-26 122.1 86 70.9
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 3.7e-26 121.3 88 67.0
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 6.4e-26 120.6 90 72.2
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 6.4e-26 120.6 87 67.8
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 8.3e-26 120.2 88 69.3
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 8.3e-26 120.2 83 69.9
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 8.3e-26 120.2 84 66.7
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 8.3e-26 120.2 84 66.7
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 1.1e-25 119.8 88 64.8
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 1.4e-25 119.4 88 64.8
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.4e-25 119.4 87 66.7
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 1.9e-25 119.0 90 66.7
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.9e-25 119.0 87 65.5
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 2.4e-25 118.6 86 68.6
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 4.1e-25 117.9 105 61.9
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 7.1e-25 117.1 86 69.8
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 9.2e-25 116.7 90 66.7
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 1.6e-24 115.9 87 67.8
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 2.1e-24 115.5 82 70.7
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 2.1e-24 115.5 90 65.6
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 2.7e-24 115.2 126 54.0
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 1.0e-23 113.2 88 62.5
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 1.0e-23 113.2 87 63.2
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.3e-23 112.8 88 67.0
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 3.0e-23 111.7 90 64.4
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 3.9e-23 111.3 87 65.5
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 3.9e-23 111.3 82 69.5
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 6.6e-23 110.5 82 69.5
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 8.6e-23 110.2 123 50.4
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 1.1e-22 109.8 87 63.2
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 1.1e-22 109.8 87 63.2
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 1.1e-22 109.8 87 63.2
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 1.1e-22 109.8 87 64.4
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 3.3e-22 108.2 88 63.6
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 4.3e-22 107.8 88 63.6
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 4.3e-22 107.8 87 62.1
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 4.3e-22 107.8 87 62.1
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 1.2e-21 106.3 87 62.1
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 2.1e-21 105.5 87 60.9
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 2.1e-21 105.5 87 60.9
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 2.8e-21 105.1 87 60.9
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 3.6e-21 104.8 82 64.6
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 4.7e-21 104.4 87 60.9
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 1.4e-20 102.8 87 59.8
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 2.4e-20 102.1 141 44.7
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 2.4e-20 102.1 141 44.7
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 3.1e-20 101.7 87 58.6
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 6.8e-20 100.5 87 59.8
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 2.6e-19 98.6 114 51.8
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 9.9e-19 96.7 71 69.0
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 4.9e-18 94.4 82 64.6
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 3.9e-15 84.7 57 71.9
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 8.7e-15 83.6 86 54.7
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 8.7e-15 83.6 65 58.5
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 1.5e-14 82.8 59 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 5.6e-14 80.9 87 55.2
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 2.1e-13 79.0 49 77.6
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 3.6e-13 78.2 196 31.6
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 4.7e-13 77.8 48 77.1
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 6.2e-13 77.4 80 52.5
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 2.4e-12 75.5 48 75.0
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 6.9e-12 73.9 48 70.8
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 5.8e-11 70.9 48 66.7
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 8.4e-10 67.0 48 66.7
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 6.0e-08 60.8 41 73.2
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 3.0e-07 58.5 54 59.3


User provided reference genes

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