Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 6.7e-218 760.4 382 100.0
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 1.1e-199 699.9 383 91.9
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 9.2e-199 696.8 383 91.9
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 1.9e-183 646.0 383 86.4
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 4.7e-179 631.3 383 85.1
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 4.7e-179 631.3 383 85.1
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.1e-178 630.2 383 85.4
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.3e-178 629.0 383 85.1
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 8.9e-178 627.1 383 84.9
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 4.3e-172 608.2 383 80.2
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.8e-170 602.8 386 80.1
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 3.4e-169 598.6 383 77.8
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.7e-168 596.3 383 77.5
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 8.4e-168 594.0 383 79.6
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 8.4e-168 594.0 383 79.6
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 1.1e-167 593.6 383 78.9
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 3.2e-167 592.0 383 78.6
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 2.1e-166 589.3 385 78.2
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 2.1e-166 589.3 389 77.9
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.0e-165 587.0 383 77.3
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 3.9e-165 585.1 383 78.3
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 8.7e-165 583.9 392 77.3
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 1.5e-164 583.2 380 78.7
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 1.9e-164 582.8 385 78.4
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 2.5e-164 582.4 383 77.5
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 4.3e-164 581.6 381 76.4
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 9.6e-164 580.5 382 77.7
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 3.1e-162 575.5 384 76.0
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 9.0e-162 573.9 383 76.2
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 2.0e-161 572.8 394 74.1
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 1.3e-160 570.1 388 74.0
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.7e-160 569.7 391 74.2
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.2e-160 569.3 386 74.9
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.2e-160 569.3 386 74.9
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 6.4e-160 567.8 391 74.4
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 6.4e-160 567.8 387 75.7
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 8.4e-160 567.4 387 74.2
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 2.4e-159 565.8 391 75.7
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 9.3e-159 563.9 387 75.5
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 1.2e-158 563.5 386 75.6
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 3.5e-158 562.0 382 75.1
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 7.8e-158 560.8 383 75.2
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 3.0e-157 558.9 370 75.7
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.1e-156 557.0 370 75.1
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 3.3e-156 555.4 384 74.2
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 4.3e-156 555.1 384 74.5
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 7.3e-156 554.3 389 73.3
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 7.3e-156 554.3 459 65.4
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 1.3e-155 553.5 402 72.4
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.3e-155 553.5 381 73.5
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 2.8e-155 552.4 395 71.9
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 2.8e-155 552.4 387 73.1
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 4.8e-155 551.6 387 73.6
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.8e-154 549.7 383 74.7
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 1.8e-154 549.7 388 71.6
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 2.4e-154 549.3 373 74.0
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 5.3e-154 548.1 382 73.3
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 6.9e-154 547.7 359 76.6
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 2.0e-153 546.2 386 73.6
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 2.0e-153 546.2 386 73.6
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 3.4e-153 545.4 383 73.6
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 7.6e-153 544.3 299 87.0
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 2.2e-152 542.7 372 74.5
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 3.8e-152 542.0 383 72.8
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 8.4e-152 540.8 383 72.6
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 1.1e-151 540.4 373 72.7
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 1.1e-151 540.4 385 70.1
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 1.4e-151 540.0 383 72.3
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 2.4e-151 539.3 431 67.1
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 5.4e-151 538.1 390 71.8
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 3.5e-150 535.4 388 71.6
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 6.0e-150 534.6 383 71.5
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.0e-149 533.9 383 70.8
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 1.3e-147 526.9 390 71.0
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 1.1e-146 523.9 492 59.8
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.4e-146 523.5 379 70.7
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 9.0e-146 520.8 383 68.7
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 6.5e-144 514.6 390 68.7
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 1.9e-143 513.1 391 68.5
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 9.3e-143 510.8 383 68.1
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.3e-141 506.9 384 67.7
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 2.3e-141 506.1 283 84.8
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 1.5e-140 503.4 387 67.2
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 1.3e-139 500.4 424 64.9
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 1.1e-138 497.3 334 71.9
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 2.0e-137 493.0 387 66.1
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 2.0e-137 493.0 383 67.4
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.1e-135 487.3 392 66.3
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.2e-135 485.7 284 81.3
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 6.1e-134 481.5 385 66.5
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 4.8e-131 471.9 397 64.2
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.0e-129 466.5 392 64.0
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 4.5e-129 465.3 304 71.4
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.0e-128 464.2 392 63.5
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 1.7e-128 463.4 296 74.3
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 2.2e-123 446.4 383 65.0
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 1.7e-120 436.8 364 63.2
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 3.2e-119 432.6 324 71.0
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.6e-105 387.1 314 58.6
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 7.7e-105 384.8 228 79.8
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.2e-104 383.3 321 56.7
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 2.3e-101 373.2 361 52.4
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.3e-99 367.5 250 72.8
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 4.8e-99 365.5 213 81.2
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 4.8e-99 365.5 213 81.2
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 4.8e-99 365.5 213 81.2
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 9.1e-98 361.3 293 56.3
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 2.9e-96 356.3 234 70.9
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 9.8e-92 341.3 213 76.1
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.6e-86 323.9 291 61.2
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 3.4e-84 316.2 290 51.7
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 2.1e-78 297.0 158 94.9
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 1.8e-77 293.9 304 46.7
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 2.9e-75 286.6 230 63.5
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 6.6e-72 275.4 177 75.1
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 5.6e-71 272.3 345 41.7
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.2e-70 271.2 278 47.5
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 1.8e-61 240.7 135 86.7
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 4.2e-42 176.4 169 59.8
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 4.6e-41 172.9 161 50.9
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 3.0e-40 170.2 189 48.7
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 1.9e-34 151.0 108 67.6
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 2.3e-32 144.1 97 67.0
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 3.7e-30 136.7 170 51.8
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.7e-25 120.6 87 64.4
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 5.3e-21 106.3 64 71.9
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 6.7e-16 89.4 47 85.1
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 6.7e-16 89.4 47 85.1
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 8.5e-11 72.4 109 45.9
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 2.8e-06 57.4 41 65.9
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 4.8e-06 56.6 43 62.8


User provided reference genes

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