Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 2.2e-77 292.4 158 100.0
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 4.0e-39 165.2 174 62.6
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.4e-28 130.2 161 59.6
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.2e-27 127.1 161 57.8
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 5.9e-27 124.8 161 57.1
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 8.6e-26 120.9 161 55.3
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 8.6e-26 120.9 161 54.7
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 1.9e-25 119.8 110 63.6
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.2e-24 117.1 156 51.3
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 4.7e-24 115.2 114 61.4
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 2.6e-22 109.4 100 60.0
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 4.4e-22 108.6 143 53.8
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 1.7e-21 106.7 156 49.4
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 1.7e-21 106.7 155 51.0
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 6.4e-21 104.8 168 48.8
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.4e-20 103.6 105 60.0
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 1.4e-20 103.6 115 61.7
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.9e-20 103.2 109 59.6
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.4e-20 102.8 109 59.6
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 2.4e-20 102.8 151 54.3
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 3.2e-20 102.4 104 58.7
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 3.2e-20 102.4 104 58.7
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 3.2e-20 102.4 99 61.6
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 3.2e-20 102.4 159 49.7
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 7.0e-20 101.3 156 46.2
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 7.0e-20 101.3 154 52.6
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 2.0e-19 99.8 156 47.4
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 2.7e-19 99.4 100 59.0
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 3.5e-19 99.0 101 60.4
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 4.6e-19 98.6 140 49.3
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 6.0e-19 98.2 129 53.5
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 1.3e-18 97.1 134 50.7
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.3e-18 97.1 158 47.5
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 1.3e-18 97.1 156 44.9
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.7e-18 96.7 141 51.1
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 3.0e-18 95.9 139 54.0
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 8.6e-18 94.4 155 47.1
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 2.5e-17 92.8 151 50.3
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 2.5e-17 92.8 156 44.2
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 3.3e-17 92.4 156 42.9
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 4.3e-17 92.0 156 46.2
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 5.6e-17 91.7 156 43.6
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 9.5e-17 90.9 110 53.6
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 9.5e-17 90.9 160 43.8
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 9.5e-17 90.9 106 57.5
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 1.2e-16 90.5 151 49.0
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 2.8e-16 89.4 116 49.1
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 3.6e-16 89.0 155 42.6
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 3.6e-16 89.0 123 48.0
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 8.1e-16 87.8 120 52.5
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 1.8e-15 86.7 102 54.9
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 4.0e-15 85.5 112 50.0
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 8.9e-15 84.3 94 55.3
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.2e-14 84.0 160 42.5
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 3.4e-14 82.4 155 40.6
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 4.4e-14 82.0 156 41.7
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 4.4e-14 82.0 156 42.3
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 5.8e-14 81.6 98 53.1
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 7.5e-14 81.3 148 42.6
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 9.8e-14 80.9 107 54.2
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 9.8e-14 80.9 102 52.0
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.7e-13 80.1 124 46.0
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 2.9e-13 79.3 135 42.2
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 2.9e-13 79.3 135 42.2
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 1.1e-12 77.4 156 39.7
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.9e-12 76.6 112 45.5
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 2.4e-12 76.3 112 50.0
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 2.4e-12 76.3 121 46.3
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 3.2e-12 75.9 94 53.2
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 7.1e-12 74.7 112 49.1
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 7.1e-12 74.7 103 49.5
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 7.1e-12 74.7 149 42.3
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 9.2e-12 74.3 103 49.5
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.1e-11 73.2 118 43.2
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 2.7e-11 72.8 103 50.5
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 6.0e-11 71.6 103 48.5
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 7.8e-11 71.2 103 48.5
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 5.1e-10 68.6 103 46.6
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 6.6e-10 68.2 103 48.5
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 6.6e-10 68.2 103 49.5
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 8.6e-10 67.8 153 37.3
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 1.9e-09 66.6 132 40.9
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.9e-09 66.6 102 48.0
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 2.5e-09 66.2 103 43.7
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 2.5e-09 66.2 104 43.3
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 4.3e-09 65.5 109 43.1
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 4.3e-09 65.5 111 43.2
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 4.3e-09 65.5 97 46.4
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 5.6e-09 65.1 110 43.6
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.3e-09 64.7 130 40.8
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 6.2e-08 61.6 109 42.2
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 2.3e-07 59.7 142 32.4
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.1e-07 59.3 110 40.0
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 4.0e-07 58.9 43 65.1
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 4.4e-06 55.5 107 41.1


User provided reference genes

Program Settings