Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 2.5e-100 368.6 169 100.0
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 3.7e-67 258.5 145 82.1
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 3.7e-67 258.5 146 83.6
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 1.7e-64 249.6 147 81.6
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 8.5e-64 247.3 147 81.0
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 9.4e-63 243.8 147 80.3
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 5.2e-61 238.0 144 75.7
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.6e-60 235.7 145 78.6
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 2.6e-60 235.7 147 74.1
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 1.7e-59 233.0 141 76.6
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 1.7e-59 233.0 144 74.3
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 6.3e-59 231.1 141 75.9
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 2.6e-57 225.7 162 69.1
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 7.7e-57 224.2 140 73.6
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 7.7e-57 224.2 145 71.0
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 1.7e-56 223.0 146 72.6
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 1.7e-56 223.0 129 76.7
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 2.9e-56 222.2 148 70.9
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 6.5e-56 221.1 144 70.1
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 1.1e-55 220.3 148 69.6
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 1.9e-55 219.5 146 71.2
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 3.2e-55 218.8 133 76.7
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 3.2e-55 218.8 144 68.8
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 4.2e-55 218.4 148 68.2
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 2.1e-54 216.1 125 74.4
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 2.7e-54 215.7 145 69.7
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 3.6e-54 215.3 150 68.7
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 1.4e-53 213.4 117 81.2
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 4.0e-53 211.8 124 75.0
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 1.5e-52 209.9 147 65.3
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 2.0e-52 209.5 105 84.8
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 2.0e-52 209.5 108 81.5
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 3.3e-52 208.8 130 75.4
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 5.7e-52 208.0 116 78.4
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 1.3e-51 206.8 146 65.1
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 1.3e-51 206.8 147 65.3
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 2.2e-51 206.1 126 73.8
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 3.7e-51 205.3 157 59.9
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 3.7e-51 205.3 144 66.7
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 4.8e-51 204.9 149 66.4
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 6.3e-51 204.5 149 66.4
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 1.1e-50 203.8 105 83.8
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 1.4e-50 203.4 129 71.3
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 3.1e-50 202.2 105 81.0
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 4.1e-50 201.8 112 76.8
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 4.1e-50 201.8 112 76.8
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 9.1e-50 200.7 105 81.9
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 2.0e-49 199.5 113 76.1
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 3.5e-49 198.7 145 64.1
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 5.9e-49 198.0 105 81.0
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 7.7e-49 197.6 150 59.3
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 5.0e-48 194.9 112 74.1
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 6.5e-48 194.5 144 62.5
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 1.1e-47 193.7 158 60.1
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 1.9e-47 193.0 117 70.1
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 4.2e-47 191.8 141 63.1
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 7.2e-47 191.0 105 76.2
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 7.2e-47 191.0 193 52.3
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 3.0e-45 185.7 91 86.8
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.2e-44 183.7 153 56.9
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.6e-44 182.6 100 80.0
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 1.2e-41 173.7 88 83.0
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 1.3e-40 170.2 146 56.2
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 3.3e-39 165.6 132 56.1
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 2.6e-36 156.0 77 81.8
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 2.2e-35 152.9 76 85.5
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 4.5e-33 145.2 77 77.9
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 4.5e-33 145.2 92 71.7
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 8.9e-29 131.0 81 64.2
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 1.2e-28 130.6 81 64.2
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 5.6e-23 111.7 78 66.7
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.3e-16 90.5 51 70.6
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 1.0e-08 64.3 53 54.7
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 8.6e-08 61.2 49 59.2
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 2.1e-06 56.6 32 68.8


User provided reference genes

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