Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G006100 Prunus persica HOM05D009914 ORTHO05D011200 1.3e-25 119.0 63 100.0
Prupe.2G006300 Prunus persica HOM05D009914 ORTHO05D011200 3.5e-23 110.9 63 93.7
Prupe.2G006700 Prunus persica HOM05D009914 ORTHO05D011200 3.5e-23 110.9 63 93.7
RcHm_v2.0_Chr2g0123781 Rosa chinensis HOM05D009914 ORTHO05D012375 5.0e-09 63.9 65 63.1
RcHm_v2.0_Chr2g0123881 Rosa chinensis HOM05D009914 ORTHO05D012375 1.6e-07 58.9 68 54.4
RcHm_v2.0_Chr2g0123791 Rosa chinensis HOM05D009914 ORTHO05D012375 2.1e-07 58.5 69 60.9
Prupe.2G006900 Prunus persica HOM05D009914 ORTHO05D012375 2.7e-07 58.2 69 52.2
RcHm_v2.0_Chr2g0123821 Rosa chinensis HOM05D009914 ORTHO05D012375 6.1e-07 57.0 67 55.2
CiPaw.14G027700 Carya illinoinensis HOM05D011480 ORTHO05D028670 1.4e-06 55.8 64 60.9
Phvul.005G038500 Phaseolus vulgaris HOM05D012142 ORTHO05D011200 1.4e-06 55.8 64 54.7
RcHm_v2.0_Chr1g0314271 Rosa chinensis HOM05D009914 ORTHO05D012375 1.8e-06 55.5 70 52.9
Manes.10G148600 Manihot esculenta HOM05D011480 ORTHO05D011200 3.0e-06 54.7 68 57.4
Potri.001G226400 Populus trichocarpa HOM05D011480 ORTHO05D011200 5.1e-06 53.9 63 60.3
Potri.001G226700 Populus trichocarpa HOM05D011480 ORTHO05D011200 5.1e-06 53.9 63 60.3
Prupe.2G006800 Prunus persica HOM05D009914 ORTHO05D012375 5.1e-06 53.9 70 50.0
Prupe.2G006400 Prunus persica HOM05D009914 ORTHO05D012375 6.7e-06 53.5 68 52.9
Glyma.08G151100 Glycine max HOM05D012142 ORTHO05D011200 8.8e-06 53.1 64 57.8
Manes.10G148500 Manihot esculenta HOM05D011480 ORTHO05D011200 8.8e-06 53.1 64 57.8


User provided reference genes

Program Settings