Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 1.2e-208 729.6 371 100.0
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 1.9e-177 625.9 373 86.1
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 6.2e-176 620.9 378 86.0
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 9.9e-174 613.6 387 84.0
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.2e-171 606.7 379 84.2
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 3.0e-170 602.1 370 83.5
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 5.1e-170 601.3 370 83.5
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.1e-169 600.1 375 84.0
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 8.4e-165 583.9 371 81.7
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.1e-164 583.6 369 82.9
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 7.1e-164 580.9 369 82.7
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 2.1e-160 569.3 374 79.7
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 1.4e-159 566.6 384 79.4
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 9.0e-159 563.9 372 80.1
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 2.0e-158 562.8 374 79.9
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 7.6e-158 560.8 374 79.4
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 2.2e-157 559.3 369 77.8
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 2.2e-157 559.3 369 77.8
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 2.9e-157 558.9 369 78.0
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 2.9e-157 558.9 378 77.8
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 2.5e-156 555.8 378 77.2
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 2.5e-156 555.8 376 80.1
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 5.5e-156 554.7 375 79.2
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 7.1e-156 554.3 374 78.6
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.2e-155 553.5 391 76.7
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 2.7e-155 552.4 369 77.2
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.7e-155 552.4 369 77.5
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.8e-154 549.7 369 78.0
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 3.7e-152 542.0 380 77.1
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 3.7e-152 542.0 377 77.5
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 6.3e-152 541.2 369 77.0
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 8.2e-152 540.8 372 78.5
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.4e-151 540.0 369 76.4
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 2.4e-151 539.3 376 75.5
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 5.3e-151 538.1 384 74.7
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.2e-150 537.0 330 85.2
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 2.6e-150 535.8 361 77.3
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 3.4e-150 535.4 378 76.7
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.0e-149 533.9 330 84.8
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.3e-149 533.5 341 82.1
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 1.3e-149 533.5 368 77.2
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 6.5e-149 531.2 372 76.1
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 2.5e-148 529.3 370 75.7
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 4.2e-148 528.5 371 76.0
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 4.2e-148 528.5 371 76.3
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 4.2e-148 528.5 371 76.3
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 7.2e-148 527.7 373 76.1
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 2.1e-147 526.2 373 74.5
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 2.7e-147 525.8 376 75.0
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 2.7e-147 525.8 375 75.2
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 2.7e-147 525.8 376 75.0
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 4.6e-147 525.0 376 75.3
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 6.1e-147 524.6 364 76.9
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 7.9e-147 524.2 381 73.8
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 3.0e-146 522.3 373 75.1
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 3.0e-146 522.3 366 75.7
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 8.7e-146 520.8 378 74.3
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 1.1e-145 520.4 372 75.3
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 1.1e-145 520.4 368 73.9
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 2.5e-145 519.2 375 73.3
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 5.7e-145 518.1 342 80.1
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 9.7e-145 517.3 373 74.8
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 1.8e-143 513.1 373 74.0
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 4.1e-143 511.9 334 77.2
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 6.9e-143 511.1 370 72.7
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 6.9e-143 511.1 371 73.3
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 1.5e-142 510.0 377 72.7
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 3.4e-142 508.8 375 74.4
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 4.5e-142 508.4 399 72.7
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 5.9e-142 508.1 369 74.3
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 1.3e-141 506.9 374 73.5
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 1.7e-141 506.5 371 73.6
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 2.9e-141 505.8 344 77.3
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 2.9e-141 505.8 378 73.8
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 5.0e-141 505.0 327 80.1
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.0e-141 505.0 327 80.7
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 2.5e-140 502.7 383 74.2
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.2e-140 501.9 327 80.4
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 2.1e-139 499.6 373 72.1
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 2.7e-139 499.2 378 73.5
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 6.1e-139 498.0 373 71.8
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 7.9e-139 497.7 380 73.4
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 1.4e-138 496.9 370 71.9
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 4.3e-137 491.9 404 66.3
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 8.2e-136 487.6 325 78.8
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 6.9e-135 484.6 372 70.2
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 1.3e-133 480.3 375 70.1
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 1.4e-132 476.9 372 69.1
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 7.2e-132 474.6 381 67.5
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 9.4e-132 474.2 376 69.7
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 4.7e-131 471.9 389 67.4
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 4.7e-131 471.9 321 77.6
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 1.0e-130 470.7 278 87.8
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.3e-130 469.5 327 76.8
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 5.1e-130 468.4 346 72.8
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 6.3e-128 461.5 359 68.8
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 8.2e-128 461.1 377 67.1
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 1.2e-126 457.2 334 73.7
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 2.0e-126 456.4 318 75.5
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 4.2e-124 448.7 319 75.5
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.1e-119 434.1 377 66.8
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 2.4e-119 433.0 336 69.9
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 4.0e-114 415.6 299 72.9
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 4.4e-113 412.1 313 69.3
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 9.1e-111 404.4 292 70.2
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 1.7e-109 400.2 233 85.4
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.5e-108 397.1 324 64.2
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 1.0e-101 374.4 285 66.3
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 6.8e-98 361.7 294 68.4
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.8e-95 353.6 337 58.8
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 1.2e-91 340.9 206 84.5
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 1.5e-84 317.4 248 62.5
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 1.4e-82 310.8 268 61.6
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 8.9e-82 308.1 279 60.2
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.9e-79 300.4 239 69.9
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.1e-79 299.3 229 71.6
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 1.7e-77 293.9 258 57.0
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 4.3e-76 289.3 206 75.7
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.1e-68 264.6 189 71.4
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 4.4e-65 252.7 160 84.4
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 4.5e-57 226.1 118 95.8
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 6.4e-56 222.2 188 68.1
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 1.1e-55 221.5 188 66.5
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 3.3e-52 209.9 234 51.7
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 4.8e-51 206.1 181 65.2
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 1.8e-50 204.1 181 65.2
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 2.4e-47 193.7 109 88.1
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 3.3e-44 183.3 137 73.0
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 4.2e-39 166.4 114 72.8
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 3.3e-36 156.8 110 78.2
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 2.9e-32 143.7 237 37.1
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 2.3e-29 134.0 251 35.5
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 5.0e-24 116.3 156 46.2
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 3.2e-23 113.6 181 44.2
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 7.2e-23 112.5 164 39.6
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 3.9e-21 106.7 241 31.1
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.6e-20 104.0 73 75.3
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.7e-19 100.1 65 76.9
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 9.1e-18 95.5 78 59.0
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 2.0e-17 94.4 50 90.0


User provided reference genes

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