Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 1.4e-170 602.8 290 100.0
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 7.3e-132 474.2 275 81.8
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 7.3e-132 474.2 359 68.0
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 9.9e-129 463.8 276 79.0
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.9e-128 462.2 277 78.3
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.2e-126 456.8 299 73.2
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 4.6e-126 454.9 277 77.6
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.3e-120 436.8 275 73.8
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 7.1e-119 431.0 275 73.5
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 9.3e-119 430.6 275 73.8
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.0e-118 427.9 276 74.6
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 9.6e-116 420.6 256 77.7
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.1e-114 417.2 275 71.3
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 9.0e-114 414.1 275 72.4
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 1.5e-113 413.3 275 70.5
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 7.6e-113 411.0 275 69.8
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 1.0e-112 410.6 275 68.7
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 1.0e-112 410.6 265 70.9
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 2.2e-112 409.5 275 70.5
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 6.5e-112 407.9 275 68.4
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 8.4e-112 407.5 275 70.2
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 8.4e-112 407.5 275 70.2
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.4e-111 406.8 275 69.1
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.4e-111 406.8 275 68.7
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 2.7e-110 402.5 274 67.5
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 4.6e-110 401.7 275 67.6
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 6.0e-110 401.4 275 66.9
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 1.0e-109 400.6 275 68.0
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.8e-109 399.8 276 67.8
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 1.5e-108 396.7 264 70.1
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 2.8e-107 392.5 276 68.5
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 1.4e-106 390.2 275 68.0
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 2.4e-106 389.4 275 66.9
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 5.3e-106 388.3 278 65.8
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 3.4e-105 385.6 275 67.6
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 3.4e-105 385.6 276 66.7
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 1.3e-104 383.6 275 66.2
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 3.8e-104 382.1 277 63.9
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 3.8e-104 382.1 275 65.8
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 5.0e-104 381.7 278 64.7
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 8.5e-104 380.9 275 64.4
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 1.9e-103 379.8 284 66.5
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 2.5e-103 379.4 278 64.4
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.2e-102 377.1 273 65.2
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.6e-102 376.7 278 64.0
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 3.6e-102 375.6 277 63.9
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 4.6e-102 375.2 273 63.7
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 7.9e-102 374.4 276 64.5
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 7.9e-102 374.4 273 62.6
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 3.0e-101 372.5 275 64.7
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 5.1e-101 371.7 278 63.3
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 2.5e-100 369.4 266 66.5
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 4.3e-100 368.6 283 61.8
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 5.7e-100 368.2 265 63.4
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 5.7e-100 368.2 275 63.6
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 2.8e-99 365.9 273 61.5
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 4.8e-99 365.2 274 64.2
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 2.4e-98 362.8 275 61.8
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 5.3e-98 361.7 273 63.4
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 2.0e-97 359.8 276 63.0
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 5.9e-97 358.2 275 60.4
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.3e-96 357.1 279 62.0
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 2.9e-96 355.9 273 62.3
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 3.8e-96 355.5 275 63.6
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 1.4e-95 353.6 275 59.3
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 1.9e-95 353.2 265 62.3
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 1.9e-95 353.2 275 60.4
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 4.2e-95 352.1 263 61.2
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 4.2e-95 352.1 263 61.2
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 5.5e-95 351.7 275 60.4
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 7.2e-95 351.3 265 61.5
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.2e-94 350.5 263 62.7
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 4.6e-94 348.6 273 61.9
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 6.1e-94 348.2 264 59.8
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.4e-93 347.1 275 60.0
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 1.3e-91 340.5 273 60.1
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 2.8e-91 339.3 275 57.8
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 3.7e-91 339.0 287 56.1
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 6.3e-91 338.2 306 54.9
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 4.1e-90 335.5 242 67.4
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 6.9e-90 334.7 244 66.0
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 7.7e-89 331.3 201 79.1
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.4e-87 327.0 266 58.6
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 5.5e-87 325.1 263 59.7
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 6.3e-83 311.6 280 56.1
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.2e-81 307.4 275 53.8
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 2.6e-81 306.2 191 76.4
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 3.5e-81 305.8 275 54.2
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.9e-79 300.1 202 70.3
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.4e-77 293.9 193 73.6
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.8e-77 293.5 285 52.6
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.5e-76 290.4 253 55.3
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 3.7e-75 285.8 273 51.6
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 6.3e-75 285.0 202 69.3
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 6.3e-75 285.0 202 69.3
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.8e-74 283.5 240 55.8
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 5.3e-74 282.0 231 60.6
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 7.7e-73 278.1 241 57.3
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 1.7e-72 276.9 275 48.7
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.7e-67 260.4 185 62.7
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 4.8e-67 258.8 286 49.0
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 4.5e-65 252.3 236 55.9
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 4.4e-60 235.7 214 57.0
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 4.6e-49 199.1 145 65.5
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 1.7e-48 197.2 275 39.6
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 1.5e-47 194.1 135 68.1
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.5e-44 184.1 130 59.2
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 6.4e-43 178.7 242 43.8
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 1.2e-38 164.5 130 59.2
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 1.9e-34 150.6 100 71.0
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 5.6e-31 139.0 146 50.0
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 1.1e-26 124.8 281 33.5
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 1.7e-19 100.9 150 40.7
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 4.9e-19 99.4 75 61.3
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 4.6e-17 92.8 103 48.5
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 8.1e-14 82.0 106 40.6


User provided reference genes

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