Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 1.6e-166 589.3 300 100.0
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 4.9e-147 524.6 305 88.2
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 4.2e-138 495.0 301 84.7
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 4.9e-123 444.9 246 88.2
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 1.1e-122 443.7 246 87.8
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.9e-122 443.0 243 88.5
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 7.9e-121 437.6 297 75.1
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 3.0e-120 435.6 256 84.0
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 3.0e-120 435.6 254 83.1
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.9e-119 433.0 294 75.5
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 2.5e-119 432.6 249 84.7
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 4.3e-119 431.8 259 82.6
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 1.3e-118 430.3 286 75.2
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 1.3e-118 430.3 292 74.3
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 2.1e-118 429.5 292 75.0
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 2.8e-118 429.1 270 78.9
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.8e-118 429.1 259 82.2
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 1.4e-117 426.8 297 74.1
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 9.0e-117 424.1 250 81.2
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 2.6e-116 422.5 258 79.8
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 3.4e-116 422.2 298 71.5
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.0e-115 420.6 260 79.6
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.0e-115 420.6 284 74.6
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.7e-115 419.9 273 78.0
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 3.8e-115 418.7 259 81.5
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.1e-114 417.2 285 72.6
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 1.9e-114 416.4 278 74.8
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 3.2e-114 415.6 285 73.0
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 4.2e-114 415.2 257 78.6
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 9.3e-114 414.1 260 77.7
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 1.2e-113 413.7 251 80.1
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.2e-113 413.7 289 72.0
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.2e-113 413.7 285 72.3
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.6e-113 413.3 278 74.1
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 2.1e-113 412.9 253 81.0
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 2.1e-113 412.9 260 77.7
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 3.5e-113 412.1 254 80.3
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 4.6e-113 411.8 264 78.8
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 6.0e-113 411.4 251 80.5
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 7.9e-113 411.0 252 79.8
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 1.0e-112 410.6 253 80.6
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 3.9e-112 408.7 246 80.5
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.5e-111 406.8 245 78.0
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.5e-111 406.8 253 79.1
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 2.5e-111 406.0 256 79.3
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 4.3e-111 405.2 256 76.6
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 7.4e-111 404.4 252 75.8
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 9.6e-111 404.1 279 70.6
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 1.3e-110 403.7 283 71.7
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 4.8e-110 401.7 252 78.6
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 6.3e-110 401.4 253 78.3
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 8.2e-110 401.0 252 77.8
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.1e-109 400.6 254 75.6
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 1.4e-109 400.2 251 78.5
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 2.4e-109 399.4 288 69.4
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 6.9e-109 397.9 282 71.3
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 1.2e-108 397.1 249 75.9
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 3.4e-108 395.6 262 75.2
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 3.4e-108 395.6 262 75.2
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 1.0e-107 394.0 256 76.2
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 1.0e-107 394.0 256 76.2
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 1.0e-107 394.0 256 76.2
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 3.2e-106 389.0 228 82.5
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 1.1e-103 380.6 260 74.2
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.2e-102 376.3 226 81.9
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 1.2e-100 370.5 253 73.5
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 2.5e-98 362.8 243 71.2
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 1.0e-96 357.5 219 79.9
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 3.0e-96 355.9 242 74.4
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 8.8e-96 354.4 341 54.8
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 3.3e-95 352.4 257 69.6
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 6.3e-94 348.2 218 78.0
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 3.4e-92 342.4 245 72.2
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 1.7e-91 340.1 210 77.6
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.4e-90 337.0 196 81.6
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 6.1e-89 331.6 202 78.2
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 8.8e-88 327.8 213 75.6
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 8.8e-88 327.8 254 63.8
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 2.0e-87 326.6 205 74.1
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 1.2e-84 317.4 194 77.3
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 6.5e-83 311.6 196 76.5
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 9.4e-82 307.8 269 59.1
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 4.7e-81 305.4 254 59.1
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 3.0e-80 302.8 273 54.9
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 6.7e-80 301.6 259 59.8
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.4e-79 298.9 244 57.8
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 5.3e-77 292.0 188 77.1
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.7e-75 287.0 286 56.3
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 1.5e-74 283.9 166 80.7
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 4.0e-72 275.8 228 61.8
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.4e-71 272.7 196 68.9
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 7.0e-69 265.0 246 53.3
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 5.9e-68 261.9 196 65.8
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 5.5e-66 255.4 165 73.3
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 3.6e-65 252.7 239 52.7
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.5e-63 247.3 180 65.0
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 6.3e-62 241.9 189 64.6
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.4e-61 240.7 248 52.0
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.8e-48 197.2 164 62.8
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 3.1e-48 196.4 126 74.6
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 9.8e-47 191.4 249 45.8
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 1.1e-37 161.4 93 87.1
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.5e-34 150.2 92 82.6
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 1.4e-29 134.4 106 63.2
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.1e-24 118.2 98 51.0
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.4e-21 107.8 56 87.5
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 3.5e-20 103.2 117 50.4
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 4.6e-20 102.8 64 75.0
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 6.0e-20 102.4 119 47.9
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 5.1e-19 99.4 59 84.7
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.1e-16 91.7 98 45.9
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 1.3e-14 84.7 216 31.0
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 3.5e-12 76.6 41 80.5
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 4.6e-12 76.3 52 73.1
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 2.3e-11 73.9 47 68.1
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.2e-07 61.6 36 88.9
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 4.9e-06 56.2 55 50.9


User provided reference genes

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