Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 0.0e+00 1171.0 718 100.0
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 1.5e-290 1002.7 672 85.0
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 2.7e-284 981.9 672 83.6
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 8.9e-272 940.3 671 78.4
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 9.9e-271 936.8 672 78.1
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 2.1e-268 929.1 673 75.9
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 2.3e-267 925.6 672 77.7
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 1.3e-265 919.8 672 75.9
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 2.1e-265 919.1 672 76.9
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 2.4e-264 915.6 672 77.2
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 6.9e-264 914.1 672 75.6
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 7.6e-263 910.6 672 75.3
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 2.1e-257 892.5 672 73.4
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 6.9e-256 887.5 759 68.5
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 6.9e-256 887.5 672 74.6
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 5.1e-251 871.3 642 75.2
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 4.3e-250 868.2 672 72.8
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.1e-248 863.6 675 71.9
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.1e-248 862.1 674 71.8
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 5.3e-248 861.3 672 72.5
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 2.6e-247 859.0 674 74.6
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 4.9e-246 854.7 671 72.9
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 2.7e-244 849.0 672 70.8
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 2.7e-244 849.0 671 72.3
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 1.3e-243 846.7 672 70.5
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 3.9e-243 845.1 672 70.7
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 5.7e-242 841.3 701 68.5
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 9.6e-242 840.5 672 69.3
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 2.8e-241 839.0 672 70.7
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 8.2e-241 837.4 672 70.7
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 2.9e-238 828.9 673 70.9
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 1.4e-237 826.6 678 69.2
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 2.5e-237 825.9 672 69.6
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 3.2e-237 825.5 672 69.8
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 3.6e-236 822.0 675 68.9
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 3.3e-234 815.5 743 66.8
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 5.7e-234 814.7 672 67.4
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 5.7e-234 814.7 693 67.5
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 1.3e-233 813.5 653 70.1
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 3.7e-233 812.0 672 67.7
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 8.2e-233 810.8 672 68.2
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 2.4e-232 809.3 672 66.8
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 6.9e-232 807.7 672 68.6
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 9.0e-232 807.4 672 68.6
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 2.0e-231 806.2 669 67.7
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 5.0e-230 801.6 672 67.3
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 1.9e-229 799.7 671 68.1
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 9.4e-229 797.3 669 67.3
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 2.7e-228 795.8 669 67.1
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 1.0e-227 793.9 669 66.5
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.4e-227 793.5 674 66.9
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 1.8e-227 793.1 669 66.5
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 1.8e-227 793.1 672 67.7
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 7.4e-226 787.7 669 66.5
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 2.2e-225 786.2 674 65.9
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 6.3e-225 784.6 673 66.3
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 3.1e-224 782.3 671 67.1
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 3.1e-224 782.3 672 65.3
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 4.1e-224 781.9 645 69.0
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.2e-223 780.4 673 67.8
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 4.5e-223 778.5 669 65.9
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 4.2e-221 771.9 594 75.3
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 1.6e-220 770.0 661 65.8
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 2.7e-220 769.2 671 66.2
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 7.9e-220 767.7 671 63.9
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 1.0e-219 767.3 671 64.8
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 1.5e-218 763.5 671 64.2
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 2.4e-216 756.1 761 60.1
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 1.2e-215 753.8 669 65.0
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 1.6e-215 753.4 672 64.3
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 3.5e-215 752.3 643 68.0
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 4.5e-215 751.9 674 64.5
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 5.5e-213 745.0 671 64.8
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 5.5e-213 745.0 671 64.8
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 1.6e-212 743.4 673 66.3
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 1.3e-206 723.8 674 65.3
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 5.2e-203 711.8 672 64.4
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 8.8e-203 711.1 670 61.6
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 2.0e-202 709.9 671 62.9
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 8.5e-198 694.5 672 58.9
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 2.8e-196 689.5 741 55.9
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 1.5e-194 683.7 674 60.1
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 7.8e-191 671.4 645 60.3
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 1.0e-190 671.0 644 60.7
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 4.4e-186 655.6 674 58.3
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 2.4e-184 649.8 721 54.8
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 6.6e-182 641.7 724 54.0
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 4.6e-175 619.0 670 55.2
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 1.2e-172 610.9 535 66.5
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 1.2e-170 604.4 672 54.3
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 6.8e-163 578.6 674 51.6
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 3.8e-153 546.2 577 57.0
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 6.4e-153 545.4 501 65.9
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 3.6e-148 529.6 359 80.5
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 7.1e-136 488.8 363 73.6
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 2.0e-130 470.7 299 83.6
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 3.9e-126 456.4 580 51.0
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 2.2e-121 440.7 373 68.4
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.9e-120 437.6 374 70.3
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 7.2e-112 409.1 271 80.4
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 3.8e-89 333.6 688 35.2
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 7.2e-88 329.3 321 60.7
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.6e-87 328.2 344 59.9
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 2.8e-79 300.8 272 63.2
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 6.6e-73 279.6 662 32.9
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 3.3e-72 277.3 444 46.2
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 2.8e-71 274.2 666 30.0
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 2.3e-70 271.2 377 46.9
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 1.5e-69 268.5 315 54.6
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 3.7e-68 263.8 439 44.6
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 1.6e-63 248.4 699 28.9
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 4.1e-59 233.8 691 28.9
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 3.0e-41 174.5 136 72.1
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.2e-27 127.9 84 72.6
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 4.3e-24 117.5 111 60.4
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 7.4e-24 116.7 502 25.1
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.1e-23 115.2 110 56.4
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 2.4e-19 101.7 94 64.9
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 7.9e-18 96.7 117 48.7
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 3.3e-16 91.3 105 54.3
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 3.7e-15 87.8 133 39.8
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.2e-15 87.0 55 81.8
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.5e-13 82.4 119 42.0
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 7.6e-13 80.1 115 37.4
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.0e-12 79.7 59 67.8
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 1.3e-12 79.3 136 44.9
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 5.5e-11 73.9 71 59.2
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 1.2e-10 72.8 64 57.8
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 3.9e-09 67.8 41 78.0
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 3.9e-09 67.8 44 70.5
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 6.7e-09 67.0 42 71.4
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 5.3e-06 57.4 41 70.7


User provided reference genes

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