Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G585100 Prunus persica HOM05D008164 ORTHO05D010222 1.1e-88 330.1 186 100.0
Cfa004447 Carpinus fangiana HOM05D008164 ORTHO05D010222 7.0e-27 124.8 186 49.5
Haze_09987 Corylus avellana HOM05D008164 ORTHO05D010222 1.6e-26 123.6 188 51.1
CiPaw.05G001800 Carya illinoinensis HOM05D008164 ORTHO05D010222 2.0e-26 123.2 186 43.5
Duzib235G0793 Durio zibethinus HOM05D008164 ORTHO05D010222 4.5e-26 122.1 197 42.6
Thecc.06G017700 Theobroma cacao HOM05D008164 ORTHO05D010222 9.5e-24 114.4 186 42.5
QL02p103286 Quercus lobata HOM05D008164 ORTHO05D010222 3.6e-23 112.5 203 44.8
Gohir.A05G110000 Gossypium hirsutum HOM05D008164 ORTHO05D010222 1.0e-22 110.9 199 37.2
Atru.chr6.245 Acer truncatum HOM05D008164 ORTHO05D010222 6.8e-22 108.2 190 39.5
TAR628G0422 Trochodendron aralioides HOM05D008164 ORTHO05D010222 1.2e-21 107.5 185 45.9
Ciclev10002734m.g Citrus clementina HOM05D008164 ORTHO05D010222 9.8e-21 104.4 186 38.7
Gohir.D05G110300 Gossypium hirsutum HOM05D008164 ORTHO05D010222 3.7e-20 102.4 188 46.3
Gorai.009G114500 Gossypium raimondii HOM05D008164 ORTHO05D010222 3.7e-20 102.4 188 46.3
FvH4_5g28060 Fragaria vesca HOM05D008164 ORTHO05D010222 4.9e-20 102.1 181 50.8
Dinv29630 Davidia involucrata HOM05D000112 ORTHO05D000564 6.3e-20 101.7 187 48.1
FAN18G4000 Fragaria x ananassa HOM05D008164 ORTHO05D010222 5.4e-19 98.6 182 51.6
PSO017G5192 Papaver somniferum HOM05D008164 ORTHO05D010222 1.6e-18 97.1 188 37.8
Potri.003G001200 Populus trichocarpa HOM05D008164 ORTHO05D010222 1.6e-18 97.1 189 48.7
Manes.10G108200 Manihot esculenta HOM05D008164 ORTHO05D010222 2.0e-18 96.7 130 42.3
FAN04G0245 Fragaria x ananassa HOM05D008164 ORTHO05D010222 1.0e-17 94.4 181 46.4
PGR142G0304 Punica granatum HOM05D008164 ORTHO05D010222 8.6e-17 91.3 143 40.6
Aqoxy7G02312 Aquilegia oxysepala HOM05D008164 ORTHO05D010222 9.5e-16 87.8 184 39.1
TWI14G0748 Tripterygium wilfordii HOM05D008164 ORTHO05D010222 1.6e-15 87.0 187 41.7
Lj5P282T61 Lonicera japonica HOM05D008164 ORTHO05D010222 2.3e-14 83.2 189 42.9
Sc23g0003940 Simmondsia chinensis HOM05D008164 ORTHO05D010222 6.8e-14 81.6 180 47.8
FAN08G3488 Fragaria x ananassa HOM05D008164 ORTHO05D010222 8.9e-14 81.3 119 46.2
Oeu043611.1 Olea europaea HOM05D008164 ORTHO05D010222 8.9e-14 81.3 179 43.6
PSO478G3084 Papaver somniferum HOM05D008164 ORTHO05D010222 4.4e-13 79.0 165 34.5
Cc02_g23560 Coffea canephora HOM05D008164 ORTHO05D010222 9.8e-13 77.8 200 36.0
Peaxi162Scf00011g00188 Petunia axillaris HOM05D008164 ORTHO05D010222 1.3e-12 77.4 191 40.8
BcaNung01134 Brassica carinata HOM05D008164 ORTHO05D010222 1.7e-12 77.0 185 32.4
CARHR231690 Cardamine hirsuta HOM05D008164 ORTHO05D010222 2.2e-12 76.6 175 33.7
BolC1t01882H Brassica oleracea HOM05D008164 ORTHO05D010222 3.7e-12 75.9 184 32.6
DCAR_003281 Daucus carota HOM05D008164 ORTHO05D010222 3.7e-12 75.9 192 33.9
BcaC09g50889 Brassica carinata HOM05D008164 ORTHO05D010222 4.9e-12 75.5 184 33.7
C01p19540 Brassica napus HOM05D008164 ORTHO05D010222 4.9e-12 75.5 184 33.7
Solyc01g103070.2 Solanum lycopersicum HOM05D008164 ORTHO05D010222 4.9e-12 75.5 190 42.1
Sopen01g045480 Solanum pennellii HOM05D008164 ORTHO05D010222 6.4e-12 75.1 190 42.1
ATR0580G429 Amborella trichopoda HOM05D008164 ORTHO05D010222 1.4e-11 73.9 142 35.2
PGSC0003DMG400038752 Solanum tuberosum HOM05D008164 ORTHO05D010222 3.2e-11 72.8 183 41.0
Glyma.12G164000 Glycine max HOM05D008164 ORTHO05D010222 4.1e-11 72.4 189 34.4
A01p15590 Brassica napus HOM05D008164 ORTHO05D010222 9.2e-11 71.2 184 33.2
BraA01t01499Z Brassica rapa HOM05D008164 ORTHO05D010222 9.2e-11 71.2 184 33.2
Sp7g22250 Schrenkiella parvula HOM05D008164 ORTHO05D010222 9.2e-11 71.2 182 33.0
Cpa.g.sc173.30 Carica papaya HOM05D008164 ORTHO05D010222 2.0e-10 70.1 184 32.6
AL7G28990 Arabidopsis lyrata HOM05D008164 ORTHO05D010222 2.7e-10 69.7 182 33.5
Rhsim11G0118100 Rhododendron simsii HOM05D008164 ORTHO05D010222 4.6e-10 68.9 182 34.6
Cpa.g.sc173.36 Carica papaya HOM05D008164 ORTHO05D010222 3.0e-09 66.2 185 31.9
Thhalv10026492m.g Eutrema salsugineum HOM05D008164 ORTHO05D010222 3.0e-09 66.2 188 33.0
AT4G24265 Arabidopsis thaliana HOM05D008164 ORTHO05D010222 5.0e-09 65.5 181 32.6
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 8.6e-09 64.7 166 39.2
Nitab4.5_0004668g0050 Nicotiana tabacum HOM05D008164 ORTHO05D010222 1.9e-08 63.5 176 42.6
Carub.0007s1679 Capsella rubella HOM05D008164 ORTHO05D010222 2.5e-08 63.2 204 31.9
TAR376G0048 Trochodendron aralioides HOM05D008164 ORTHO05D010222 4.3e-08 62.4 181 32.6
RcHm_v2.0_Chr7g0220231 Rosa chinensis HOM05D008164 ORTHO05D010222 7.3e-08 61.6 123 40.7
Migut.N00863 Erythranthe guttata HOM05D008164 ORTHO05D010222 9.5e-08 61.2 189 28.0
BcaC09g50645 Brassica carinata HOM05D008164 ORTHO05D010222 1.2e-07 60.8 181 31.5
C01p22560 Brassica napus HOM05D008164 ORTHO05D010222 1.2e-07 60.8 181 31.5
BolC1t02189H Brassica oleracea HOM05D008164 ORTHO05D010222 1.2e-07 60.8 181 31.5
arahy.Tifrunner.gnm1.ann1.S0ITFJ Arachis hypogaea HOM05D037561 ORTHO05D010222 3.6e-07 59.3 195 40.0
Eucgr.I02795 Eucalyptus grandis HOM05D008164 ORTHO05D010222 1.4e-06 57.4 204 29.9
Lsat_1_v5_gn_9_121861 Lactuca sativa HOM05D008164 ORTHO05D010222 3.1e-06 56.2 195 39.5


User provided reference genes

Program Settings