Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 4.8e-304 1047.0 511 100.0
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 1.0e-245 853.2 489 85.3
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 6.0e-230 800.8 491 79.8
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.8e-229 799.3 491 79.6
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 9.6e-228 793.5 496 78.8
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 3.4e-225 785.0 491 79.8
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 4.6e-222 774.6 493 78.7
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 1.8e-221 772.7 501 75.2
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 5.3e-218 761.1 490 76.5
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 2.0e-217 759.2 492 77.0
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 2.2e-216 755.7 486 76.1
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 5.0e-216 754.6 486 75.9
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 2.5e-215 752.3 490 75.9
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 2.7e-214 748.8 489 75.1
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 2.7e-214 748.8 496 75.6
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 6.1e-214 747.7 491 75.8
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 6.7e-213 744.2 499 75.2
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 4.3e-212 741.5 492 74.2
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 1.6e-211 739.6 489 74.8
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.6e-211 739.6 492 74.0
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 2.8e-211 738.8 486 75.9
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.1e-210 736.9 492 73.8
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 6.1e-206 721.1 482 74.7
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 5.7e-204 714.5 481 73.2
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 7.4e-204 714.1 497 70.6
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.7e-203 713.0 489 71.4
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 6.3e-203 711.1 502 70.7
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 9.1e-202 707.2 452 75.4
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 6.5e-200 701.0 483 72.0
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 4.7e-198 694.9 501 69.3
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.8e-197 693.0 492 70.7
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 3.9e-197 691.8 493 70.0
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 3.9e-197 691.8 490 68.8
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 3.3e-196 688.7 502 68.3
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 6.3e-195 684.5 489 69.9
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 8.2e-195 684.1 492 69.1
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 8.2e-195 684.1 486 68.3
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 2.4e-194 682.6 386 84.7
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 4.1e-194 681.8 478 69.9
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 4.1e-194 681.8 494 68.8
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 7.0e-194 681.0 488 70.3
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 2.0e-193 679.5 493 69.4
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 2.0e-193 679.5 496 68.8
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 2.0e-193 679.5 480 70.8
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 2.6e-193 679.1 490 69.8
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 4.5e-193 678.3 492 68.7
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 5.9e-193 677.9 493 69.2
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 5.9e-193 677.9 493 69.2
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 7.7e-193 677.6 491 69.2
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 1.0e-192 677.2 480 70.4
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.7e-192 676.4 458 72.7
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 2.2e-192 676.0 491 68.6
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 2.9e-192 675.6 481 69.9
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 4.2e-191 671.8 495 67.7
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 1.6e-190 669.8 495 66.7
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 1.6e-190 669.8 480 69.6
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 6.1e-190 667.9 486 67.3
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 6.1e-190 667.9 488 68.9
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 8.0e-190 667.5 455 71.4
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.0e-189 667.2 488 69.3
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 1.8e-189 666.4 450 70.9
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 3.0e-189 665.6 509 66.8
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 2.0e-188 662.9 449 72.4
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 2.6e-188 662.5 479 67.6
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 3.7e-187 658.7 522 65.1
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.4e-186 656.8 454 69.6
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 1.7e-184 649.8 470 69.1
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 2.2e-184 649.4 454 69.8
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 3.8e-184 648.7 408 76.2
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 3.8e-184 648.7 496 67.1
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 8.5e-184 647.5 407 75.9
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.1e-183 647.1 483 65.4
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 1.1e-183 647.1 407 75.7
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 1.9e-183 646.4 450 70.7
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 2.5e-183 646.0 513 63.0
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 6.1e-182 641.3 382 79.8
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 1.5e-180 636.7 466 68.9
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 2.6e-180 636.0 464 68.1
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 4.8e-179 631.7 405 73.8
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 3.1e-178 629.0 464 68.1
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.7e-176 623.2 403 74.9
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.5e-175 620.2 417 74.8
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 1.5e-175 620.2 494 62.8
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 5.5e-175 618.2 412 72.6
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 7.2e-175 617.8 474 67.1
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 8.3e-171 604.4 500 63.4
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 1.1e-170 604.0 482 63.5
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 2.1e-166 589.7 465 63.7
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 2.6e-164 582.8 352 80.4
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 2.4e-162 576.2 473 59.6
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 2.8e-158 562.8 456 60.1
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 3.6e-158 562.4 500 56.2
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 3.1e-157 559.3 477 60.0
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 3.4e-140 502.7 452 57.5
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 1.6e-137 493.8 388 60.3
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.2e-129 467.6 479 52.2
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 9.0e-117 424.9 293 72.7
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 3.5e-113 412.9 302 68.9
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 2.9e-107 393.3 230 83.9
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 1.7e-99 367.5 225 80.4
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 1.0e-96 358.2 482 42.5
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 2.3e-96 357.1 404 45.3
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 3.0e-96 356.7 277 67.5
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 2.5e-90 337.0 455 41.5
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 1.3e-75 288.1 338 49.1
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 5.2e-72 276.2 159 80.5
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 3.7e-70 270.0 276 52.2
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 2.0e-60 237.7 173 68.2
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.2e-57 228.4 272 52.6
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 9.2e-45 185.7 128 68.8
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 2.3e-35 154.5 134 64.9
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 1.1e-34 152.1 107 75.7
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 2.1e-28 131.3 141 50.4
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 7.8e-28 129.4 81 77.8
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 2.3e-27 127.9 76 76.3
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.7e-25 120.2 67 82.1
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 2.4e-21 107.8 94 59.6
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 1.5e-18 98.6 130 46.2
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.9e-18 98.2 79 57.0


User provided reference genes

Program Settings