Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 5.1e-137 491.1 254 100.0
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 6.1e-74 281.6 286 64.7
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 6.3e-71 271.6 292 62.7
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 2.7e-53 213.0 268 54.1
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 4.6e-53 212.2 249 56.6
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 7.8e-53 211.5 270 56.3
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 7.8e-53 211.5 271 55.4
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 7.8e-53 211.5 270 56.3
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 2.3e-52 209.9 254 54.3
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 3.0e-52 209.5 249 56.2
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 3.0e-52 209.5 249 56.2
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 8.6e-52 208.0 256 52.7
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.1e-51 207.6 244 52.5
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 3.6e-50 202.6 240 54.2
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 1.7e-47 193.7 269 49.8
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 6.4e-47 191.8 256 52.3
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 1.1e-46 191.0 260 49.2
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 1.0e-44 184.5 243 51.0
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 8.6e-44 181.4 229 55.0
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 3.3e-43 179.5 254 51.6
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 9.5e-43 177.9 248 47.2
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.2e-42 177.6 249 48.2
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 2.8e-42 176.4 233 50.6
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 4.7e-42 175.6 237 52.3
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 2.3e-41 173.3 242 50.4
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 3.1e-41 172.9 257 46.3
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 4.0e-41 172.6 251 48.2
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 2.6e-40 169.9 224 54.5
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 4.4e-40 169.1 242 47.9
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 1.3e-39 167.5 244 47.5
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 1.3e-39 167.5 236 51.7
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 2.2e-39 166.8 236 51.3
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 2.2e-39 166.8 234 51.7
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 2.9e-39 166.4 239 49.4
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 6.4e-39 165.2 240 50.0
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 8.3e-39 164.9 244 46.7
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 5.4e-38 162.2 232 50.0
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 7.1e-38 161.8 258 44.6
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 2.7e-37 159.8 222 47.3
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 2.7e-37 159.8 239 48.5
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 4.6e-37 159.1 233 47.2
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 3.0e-36 156.4 239 47.3
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 3.9e-36 156.0 238 48.7
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 3.3e-35 152.9 225 49.3
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 1.2e-34 151.0 266 44.4
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 2.1e-34 150.2 249 45.8
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 4.7e-34 149.1 238 44.1
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 8.1e-34 148.3 215 48.4
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 2.0e-32 143.7 280 42.1
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 3.4e-32 142.9 252 44.4
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 9.9e-32 141.4 154 59.1
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.3e-31 141.0 240 44.2
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 1.7e-31 140.6 282 41.1
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 1.7e-31 140.6 254 45.3
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 6.4e-31 138.7 224 43.3
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 3.2e-30 136.3 249 43.4
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 2.1e-29 133.7 242 43.4
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 2.7e-29 133.3 259 41.7
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 2.7e-29 133.3 253 41.5
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 3.5e-29 132.9 269 40.1
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 4.6e-29 132.5 269 41.3
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 6.0e-29 132.1 264 41.3
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 6.0e-29 132.1 267 42.3
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 1.3e-28 131.0 233 41.6
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 5.1e-28 129.0 203 47.3
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 1.9e-27 127.1 152 55.9
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 2.5e-27 126.7 300 36.3
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 1.6e-26 124.0 245 41.2
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 8.1e-26 121.7 236 39.4
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 1.3e-23 114.4 240 40.4
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 3.2e-22 109.8 225 38.7
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 3.2e-22 109.8 194 43.8
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 5.4e-22 109.0 223 39.0
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 7.1e-22 108.6 245 37.1
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 2.7e-21 106.7 245 36.7
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 7.8e-21 105.1 372 31.5
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 8.7e-20 101.7 269 35.7
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 1.5e-19 100.9 268 34.3
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 4.8e-18 95.9 226 37.2
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 4.8e-18 95.9 277 33.6
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 1.8e-17 94.0 252 33.7
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 4.0e-17 92.8 137 48.2
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 4.0e-17 92.8 255 33.3
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 5.3e-17 92.4 196 38.8
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 9.0e-17 91.7 274 31.4
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 1.3e-15 87.8 207 37.7
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 1.7e-15 87.4 251 34.3
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.9e-14 84.0 121 48.8
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 3.2e-14 83.2 142 47.2
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 9.3e-14 81.6 117 45.3
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 1.2e-13 81.3 235 33.6
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 6.0e-13 79.0 183 36.1
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 6.0e-13 79.0 183 36.1
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 1.3e-12 77.8 255 31.8
Zm00001eb202050 Zea mays HOM05D007616 ORTHO05D008751 1.3e-12 77.8 271 29.9
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 5.1e-12 75.9 243 32.9
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 5.1e-12 75.9 272 31.6
C04p26930 Brassica napus HOM05D007616 ORTHO05D008751 1.3e-10 71.2 133 41.4
BolC4t24105H Brassica oleracea HOM05D007616 ORTHO05D008751 1.3e-10 71.2 133 41.4
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 6.2e-10 68.9 48 70.8
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 8.1e-10 68.6 219 29.2
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 2.4e-09 67.0 217 29.5
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 6.9e-09 65.5 218 28.9
vmacro21919 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 9.0e-09 65.1 219 29.2
Ciclev10003995m.g Citrus clementina HOM05D007616 ORTHO05D008751 1.2e-08 64.7 69 52.2
CARHR053990 Cardamine hirsuta HOM05D012662 ORTHO05D008751 1.5e-08 64.3 274 29.9
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 1.5e-08 64.3 218 28.0
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 2.0e-08 63.9 220 27.3
Rhsim05G0130500 Rhododendron simsii HOM05D007616 ORTHO05D008751 2.0e-08 63.9 110 46.4
CDE05G2569 Ceratophyllum demersum HOM05D002661 ORTHO05D002786 2.6e-08 63.5 234 29.9
BraA09t37484Z Brassica rapa HOM05D012662 ORTHO05D008751 3.4e-08 63.2 118 44.1
Psat5g013240 Pisum sativum HOM05D002661 ORTHO05D002786 3.4e-08 63.2 223 27.8
Rhsim07G0246900 Rhododendron simsii HOM05D002661 ORTHO05D002786 3.4e-08 63.2 114 40.4
Lj4A25T51 Lonicera japonica HOM05D002661 ORTHO05D002786 5.8e-08 62.4 224 28.6
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 9.9e-08 61.6 219 28.3
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 1.3e-07 61.2 218 30.3
Os12g0182100 Oryza sativa ssp. japonica HOM05D052999 ORTHO05D049891 1.3e-07 61.2 189 30.2
Cfa013943 Carpinus fangiana HOM05D002661 ORTHO05D002786 1.7e-07 60.8 218 27.1
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 1.7e-07 60.8 227 26.0
Psat2g154760 Pisum sativum HOM05D002661 ORTHO05D002786 1.7e-07 60.8 218 28.0
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 1.7e-07 60.8 111 38.7
MSTRG.2712 Avicennia marina HOM05D002661 ORTHO05D002786 2.2e-07 60.5 227 30.0
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 2.2e-07 60.5 229 29.3
Thecc.01G019200 Theobroma cacao HOM05D002661 ORTHO05D002786 2.2e-07 60.5 220 26.8
Zm00001eb391910 Zea mays HOM05D036147 ORTHO05D008751 2.2e-07 60.5 204 29.9
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 2.9e-07 60.1 231 29.9
BcaC04g22113 Brassica carinata HOM05D012662 ORTHO05D008751 3.8e-07 59.7 105 45.7
C09p23200 Brassica napus HOM05D012662 ORTHO05D008751 3.8e-07 59.7 105 45.7
BolC9t55239H Brassica oleracea HOM05D012662 ORTHO05D008751 3.8e-07 59.7 105 45.7
Ca_15484_v3 Cicer arietinum L. HOM05D002661 ORTHO05D002786 3.8e-07 59.7 247 26.7
Dinv39512 Davidia involucrata HOM05D002661 ORTHO05D002786 3.8e-07 59.7 109 33.9
MELO3C003756.2 Cucumis melo HOM05D002661 ORTHO05D002786 4.9e-07 59.3 109 39.4
Peaxi162Scf00400g00048 Petunia axillaris HOM05D002661 ORTHO05D002786 4.9e-07 59.3 223 28.7
FAN20G0494 Fragaria x ananassa HOM05D002661 ORTHO05D002786 6.4e-07 58.9 225 28.0
MD15G1013000 Malus domestica HOM05D002661 ORTHO05D002786 8.4e-07 58.5 228 26.8
Potri.002G023000 Populus trichocarpa HOM05D002661 ORTHO05D002786 8.4e-07 58.5 225 27.6
Cpa.g.sc6.246 Carica papaya HOM05D002661 ORTHO05D002786 1.1e-06 58.2 230 27.0
Medtr3g113810 Medicago truncatula HOM05D002661 ORTHO05D002786 1.1e-06 58.2 222 27.5
Prupe.1G366100 Prunus persica HOM05D002661 ORTHO05D002786 1.1e-06 58.2 226 27.9
Sopen03g006340 Solanum pennellii HOM05D002661 ORTHO05D002786 1.4e-06 57.8 224 26.8
Solyc04g081390.4 Solanum lycopersicum HOM05D002661 ORTHO05D002786 1.9e-06 57.4 219 26.5
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 1.9e-06 57.4 227 26.0
EL10Ac1g02294 Beta vulgaris HOM05D002661 ORTHO05D002786 4.2e-06 56.2 223 29.1
AUR62003372 Chenopodium quinoa HOM05D002661 ORTHO05D002786 4.2e-06 56.2 222 26.6
Cc10_g01730 Coffea canephora HOM05D002661 ORTHO05D002786 4.2e-06 56.2 219 27.9
Gorai.009G270100 Gossypium raimondii HOM05D002661 ORTHO05D002786 4.2e-06 56.2 222 30.6
SalBow3G1681 Salvia bowleyana HOM05D002661 ORTHO05D002786 4.2e-06 56.2 105 37.1
AUR62029460 Chenopodium quinoa HOM05D002661 ORTHO05D002786 5.5e-06 55.8 222 25.7
Solyc03g033550.3 Solanum lycopersicum HOM05D002661 ORTHO05D002786 5.5e-06 55.8 224 26.8
Sopen04g035000 Solanum pennellii HOM05D002661 ORTHO05D002786 5.5e-06 55.8 115 34.8
PGSC0003DMG400009934 Solanum tuberosum HOM05D002661 ORTHO05D002786 5.5e-06 55.8 108 35.2
Phvul.009G016600 Phaseolus vulgaris HOM05D002661 ORTHO05D002786 7.1e-06 55.5 219 27.4
MSTRG.23411 Avicennia marina HOM05D002661 ORTHO05D002786 9.3e-06 55.1 225 29.8
EL10Ac6g15477 Beta vulgaris HOM05D002661 ORTHO05D002786 9.3e-06 55.1 108 37.0
Cfa006970 Carpinus fangiana HOM05D002668 ORTHO05D003295 9.3e-06 55.1 217 27.2
Migut.C00825 Erythranthe guttata HOM05D002661 ORTHO05D002786 9.3e-06 55.1 225 27.1


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