Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G568600 Prunus persica HOM05D003347 ORTHO05D003821 9.6e-66 254.6 304 100.0
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 4.1e-40 169.5 304 66.4
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 4.2e-37 159.5 304 68.8
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 7.2e-37 158.7 306 63.4
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.7e-36 156.8 304 74.7
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 7.9e-36 155.2 304 71.4
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 2.3e-35 153.7 304 70.1
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 5.1e-35 152.5 304 68.1
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.5e-34 151.0 300 67.0
FAN25G2408 Fragaria x ananassa HOM05D003347 ORTHO05D003821 7.4e-34 148.7 305 83.9
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.3e-33 147.9 300 60.3
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 4.1e-32 142.9 304 65.1
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.9e-29 134.0 325 63.4
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 9.4e-29 131.7 309 74.1
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 6.1e-28 129.0 300 67.0
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 1.0e-27 128.3 305 71.5
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 5.1e-27 125.9 304 63.8
RcHm_v2.0_Chr5g0049401 Rosa chinensis HOM05D003347 ORTHO05D003821 6.7e-27 125.6 207 86.5
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 8.8e-27 125.2 304 69.4
FvH4_3g26951 Fragaria vesca HOM05D003347 ORTHO05D003821 2.5e-26 123.6 307 79.5
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 4.3e-26 122.9 303 66.3
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 5.7e-26 122.5 304 62.5
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 7.4e-26 122.1 304 65.1
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 1.7e-25 120.9 304 65.1
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.7e-25 120.9 300 61.7
MD08G1229300 Malus domestica HOM05D003347 ORTHO05D003821 4.8e-25 119.4 142 85.9
FAN21G3803 Fragaria x ananassa HOM05D003347 ORTHO05D003821 8.2e-25 118.6 207 86.5
Duzib248G0125 Durio zibethinus HOM05D003347 ORTHO05D003821 1.4e-24 117.9 304 67.4
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.4e-24 117.1 304 60.5
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 2.0e-23 114.0 304 61.5
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 5.9e-23 112.5 296 63.2
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 1.3e-22 111.3 305 65.6
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 3.8e-22 109.8 301 55.1
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 6.5e-22 109.0 304 60.2
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 8.5e-22 108.6 206 74.3
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 2.5e-21 107.1 300 60.0
FAN11G2552 Fragaria x ananassa HOM05D003347 ORTHO05D003821 7.2e-21 105.5 307 76.9
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 9.4e-21 105.1 205 73.7
Nn1g08766 Nelumbo nucifera HOM05D003347 ORTHO05D003821 3.6e-20 103.2 301 66.8
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 6.1e-20 102.4 297 50.5
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 7.9e-20 102.1 296 60.1
CiPaw.06G147300 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.0e-19 101.7 198 81.3
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 1.4e-19 101.3 300 59.3
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 1.8e-19 100.9 330 52.4
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 2.3e-19 100.5 206 71.8
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.3e-19 100.5 221 53.8
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 5.1e-19 99.4 160 73.8
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 8.8e-19 98.6 304 69.7
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 1.1e-18 98.2 205 62.0
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 3.3e-18 96.7 205 68.3
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 5.7e-18 95.9 205 64.9
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 9.7e-18 95.1 217 57.1
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.3e-17 94.7 206 68.4
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.3e-17 94.7 304 56.6
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 2.2e-17 94.0 205 67.3
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 2.8e-17 93.6 304 54.3
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 8.2e-17 92.0 304 65.8
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 1.8e-16 90.9 306 55.6
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.1e-16 90.1 300 53.3
Glyma.08G186200 Glycine max HOM05D003347 ORTHO05D003821 4.1e-16 89.7 304 61.2
Glyma.15G046600 Glycine max HOM05D003347 ORTHO05D003821 7.0e-16 89.0 304 64.8
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 1.2e-15 88.2 205 61.5
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 2.0e-15 87.4 202 65.8
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 7.7e-15 85.5 207 64.7
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 7.7e-15 85.5 297 47.5
Potri.001G211000 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.0e-14 85.1 305 62.3
TWI23G0580 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.7e-14 84.3 196 80.6
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.2e-14 84.0 204 59.3
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 2.2e-14 84.0 204 73.0
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 6.5e-14 82.4 215 55.3
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.6e-12 77.8 211 53.1
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 2.1e-12 77.4 215 54.0
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.6e-12 76.6 202 58.4
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 3.6e-12 76.6 296 60.5
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 4.7e-12 76.3 316 57.0
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 4.7e-12 76.3 117 86.3
Cpa.g.sc113.60 Carica papaya HOM05D003347 ORTHO05D003821 8.0e-12 75.5 205 68.8
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 1.4e-11 74.7 202 63.9
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 3.0e-11 73.6 330 49.1
COL.COLO4_17865 Corchorus olitorius HOM05D003347 ORTHO05D003821 3.0e-11 73.6 117 82.9
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 5.2e-11 72.8 219 63.0
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 2.0e-10 70.9 310 48.1
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 4.4e-10 69.7 160 66.9
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 4.4e-10 69.7 208 69.2
vmacro12779 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 4.4e-10 69.7 131 59.5
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 5.7e-10 69.3 215 57.2
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 7.5e-10 68.9 204 53.4
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 1.3e-09 68.2 227 52.4
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 2.2e-09 67.4 222 58.1
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 3.7e-09 66.6 153 53.6
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 3.7e-09 66.6 113 66.4
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 4.8e-09 66.2 313 51.4
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 1.1e-08 65.1 160 61.2
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 1.1e-08 65.1 160 61.2
Aa31LG1G3970 Aethionema arabicum HOM05D003347 ORTHO05D003821 1.8e-08 64.3 125 64.8
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.8e-08 64.3 300 53.3
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 1.8e-08 64.3 207 49.3
CDE06G0340 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.4e-08 63.9 116 66.4
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 2.4e-08 63.9 160 63.8
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 2.4e-08 63.9 117 80.3
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 2.4e-08 63.9 222 53.2
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 7.0e-08 62.4 221 46.6
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 7.0e-08 62.4 117 79.5
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 9.1e-08 62.0 168 63.1
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 1.2e-07 61.6 215 57.2
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.2e-07 61.6 193 59.1
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 1.6e-07 61.2 215 57.7
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 2.0e-07 60.8 159 72.3
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 3.5e-07 60.1 116 62.1
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 3.5e-07 60.1 160 62.5
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 4.5e-07 59.7 128 57.8
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 5.9e-07 59.3 125 67.2
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 7.7e-07 58.9 294 54.1
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 7.7e-07 58.9 140 67.1
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.0e-06 58.5 235 40.4
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 1.3e-06 58.2 298 60.7
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.2e-06 57.4 195 53.8
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.9e-06 57.0 114 62.3
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.9e-06 57.0 117 74.4
Sopen05g034850 Solanum pennellii HOM05D003347 ORTHO05D003821 2.9e-06 57.0 211 62.1
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 5.0e-06 56.2 108 70.4
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 8.5e-06 55.5 80 48.8


User provided reference genes

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