Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 2.8e-77 292.0 158 100.0
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 1.7e-58 229.6 160 81.2
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 4.1e-52 208.4 160 70.0
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 7.7e-51 204.1 159 72.3
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.0e-50 203.8 155 71.6
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 5.5e-49 198.0 159 69.2
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 3.6e-48 195.3 132 81.1
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 6.1e-48 194.5 160 68.8
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 1.5e-46 189.9 160 68.1
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 2.0e-46 189.5 156 66.7
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 3.4e-46 188.7 161 67.1
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 5.7e-46 188.0 144 74.3
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 1.3e-45 186.8 144 68.8
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 4.8e-45 184.9 160 65.6
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 2.4e-44 182.6 159 62.3
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.6e-43 179.9 165 66.7
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 2.0e-43 179.5 157 64.3
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 2.7e-43 179.1 161 64.6
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.7e-43 179.1 166 65.1
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 3.5e-43 178.7 167 64.7
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 4.5e-43 178.3 166 65.7
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 7.7e-43 177.6 158 60.8
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 7.7e-43 177.6 161 60.2
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 2.2e-42 176.0 158 63.3
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 2.9e-42 175.6 159 61.0
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 2.9e-42 175.6 159 61.6
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 5.0e-42 174.9 160 63.1
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 5.0e-42 174.9 160 64.4
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 6.5e-42 174.5 160 62.5
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 6.5e-42 174.5 166 65.1
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 6.5e-42 174.5 159 61.0
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 8.5e-42 174.1 159 61.0
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 1.5e-41 173.3 160 64.4
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 2.5e-41 172.6 164 61.0
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 2.5e-41 172.6 154 64.3
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 4.2e-41 171.8 158 61.4
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 4.7e-40 168.3 158 62.0
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 2.3e-39 166.0 151 60.3
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 5.2e-39 164.9 143 65.0
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 5.2e-39 164.9 191 52.9
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.5e-38 163.3 145 60.7
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 2.0e-38 162.9 161 59.6
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 7.5e-38 161.0 158 60.8
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 9.8e-38 160.6 161 56.5
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 1.3e-37 160.2 161 56.5
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 1.3e-37 160.2 161 56.5
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 1.3e-37 160.2 199 51.3
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 1.7e-37 159.8 161 56.5
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 2.2e-37 159.5 161 56.5
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.8e-37 159.1 161 59.6
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.8e-37 159.1 161 59.6
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 3.7e-37 158.7 161 55.3
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 6.3e-37 157.9 161 55.9
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 6.3e-37 157.9 160 58.1
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 6.3e-37 157.9 127 68.5
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 6.3e-37 157.9 160 61.2
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 1.8e-36 156.4 161 55.3
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 5.9e-35 151.4 164 55.5
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 2.3e-34 149.4 158 58.2
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 2.9e-34 149.1 152 55.9
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 2.9e-34 149.1 140 62.9
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 6.6e-34 147.9 160 55.0
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 6.6e-34 147.9 158 55.1
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 1.1e-33 147.1 159 57.2
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 5.6e-33 144.8 160 51.9
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 7.3e-33 144.4 131 58.8
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 9.5e-33 144.1 132 61.4
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 1.6e-32 143.3 163 52.8
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 2.1e-32 142.9 126 58.7
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 2.1e-32 142.9 165 55.8
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 4.7e-32 141.7 166 54.8
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 1.0e-31 140.6 158 52.5
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 1.8e-31 139.8 173 48.6
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 1.8e-31 139.8 157 54.8
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 5.2e-31 138.3 160 52.5
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 1.5e-30 136.7 138 58.0
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 1.7e-29 133.3 162 52.5
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 2.2e-29 132.9 158 51.9
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 6.4e-29 131.3 133 58.6
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 1.1e-28 130.6 117 65.8
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 1.8e-28 129.8 157 49.7
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 3.2e-28 129.0 131 54.2
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 1.6e-27 126.7 168 47.6
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 2.0e-27 126.3 155 54.8
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 2.7e-27 125.9 100 72.0
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 4.6e-27 125.2 135 60.7
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 5.9e-27 124.8 136 53.7
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 5.9e-27 124.8 161 50.3
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 1.0e-26 124.0 146 54.8
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 6.6e-26 121.3 153 47.1
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 2.5e-25 119.4 152 49.3
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 5.6e-25 118.2 155 49.0
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 7.3e-25 117.9 140 52.9
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 1.4e-23 113.6 155 46.5
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 6.8e-23 111.3 155 46.5
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 1.2e-22 110.5 108 60.2
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 1.2e-22 110.5 173 46.2
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 2.6e-22 109.4 120 51.7
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 4.4e-22 108.6 108 59.3
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 7.5e-22 107.8 152 46.1
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 2.9e-21 105.9 100 58.0
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 4.9e-21 105.1 101 57.4
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 4.9e-21 105.1 113 57.5
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 5.4e-20 101.7 145 44.8
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.6e-19 100.1 97 60.8
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 2.7e-19 99.4 116 53.4
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 6.0e-19 98.2 149 43.6
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 6.0e-19 98.2 149 43.6
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 2.3e-18 96.3 102 54.9
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 8.6e-18 94.4 91 58.2
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 8.1e-16 87.8 91 58.2
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 8.1e-16 87.8 162 37.7
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 6.8e-15 84.7 106 50.0
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 8.9e-15 84.3 117 49.6
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 7.5e-14 81.3 140 42.1
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 3.7e-13 79.0 73 57.5
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 3.7e-13 79.0 76 55.3
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 6.4e-13 78.2 82 53.7
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 8.3e-13 77.8 80 50.0
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 8.3e-13 77.8 112 43.8
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 1.1e-12 77.4 88 56.8
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 5.4e-12 75.1 92 54.3
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 5.4e-12 75.1 95 53.7
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 2.7e-11 72.8 100 51.0
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 4.6e-11 72.0 99 51.5
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 1.3e-10 70.5 116 39.7
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 1.7e-10 70.1 117 45.3
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 3.0e-10 69.3 115 38.3
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 5.1e-10 68.6 148 40.5
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 1.1e-07 60.8 93 45.2
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 3.1e-07 59.3 74 47.3


User provided reference genes

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