Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 6.7e-265 916.8 452 100.0
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 1.9e-195 686.0 400 84.5
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 1.9e-195 686.0 402 83.3
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 2.4e-190 669.1 399 81.2
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 1.3e-188 663.3 400 81.0
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.9e-187 659.4 401 79.8
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 1.6e-186 656.4 400 81.0
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 2.8e-186 655.6 400 78.2
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 3.1e-185 652.1 401 79.8
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 4.0e-185 651.7 401 80.0
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.5e-184 649.8 400 78.8
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 4.4e-184 648.3 370 84.3
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 4.4e-184 648.3 407 78.9
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 9.9e-184 647.1 388 80.4
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 2.4e-182 642.5 401 78.1
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 3.2e-182 642.1 401 78.3
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 4.1e-182 641.7 386 80.3
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.3e-180 636.7 400 77.5
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 1.3e-180 636.7 403 78.4
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.7e-180 636.3 400 77.8
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 2.3e-180 636.0 405 76.8
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 3.0e-180 635.6 401 78.8
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 6.6e-180 634.4 382 80.4
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 6.2e-178 627.9 380 80.5
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 6.2e-178 627.9 425 74.4
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 8.1e-178 627.5 383 79.4
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.1e-177 627.1 346 86.4
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.4e-177 626.7 346 86.7
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 1.4e-177 626.7 401 77.6
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 1.8e-177 626.3 348 85.9
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.8e-177 626.3 442 72.6
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 2.4e-177 625.9 379 79.4
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 3.1e-177 625.5 348 85.6
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 4.0e-177 625.2 403 77.4
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 5.2e-177 624.8 346 86.4
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 8.9e-177 624.0 367 81.7
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.2e-176 623.6 400 75.8
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.5e-176 623.2 461 69.2
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 2.0e-176 622.9 403 76.4
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 2.0e-176 622.9 378 79.4
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 2.6e-176 622.5 371 80.9
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.6e-176 622.5 346 86.1
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.4e-176 622.1 346 86.4
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 7.6e-176 620.9 375 81.3
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 7.6e-176 620.9 412 74.0
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.3e-175 620.2 400 75.2
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 2.9e-175 619.0 379 79.4
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 6.4e-175 617.8 375 79.7
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 8.4e-175 617.5 349 84.8
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 1.1e-174 617.1 400 75.8
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 1.4e-174 616.7 355 83.7
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 1.9e-174 616.3 400 75.2
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 3.2e-174 615.5 400 75.5
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 5.4e-174 614.8 390 77.2
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 9.2e-174 614.0 379 78.1
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.2e-173 613.6 375 79.2
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 2.7e-173 612.5 408 75.2
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 2.7e-173 612.5 378 77.5
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 3.5e-173 612.1 400 74.8
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 4.6e-173 611.7 369 80.2
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 7.8e-173 610.9 390 76.4
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.0e-172 610.5 366 80.1
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.3e-172 610.1 400 75.0
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 3.0e-172 609.0 348 83.0
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 5.1e-172 608.2 356 82.0
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 2.5e-171 605.9 376 78.2
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 2.5e-171 605.9 342 83.6
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 2.5e-171 605.9 367 78.7
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 5.6e-171 604.7 378 76.7
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 7.3e-171 604.4 369 78.3
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 7.3e-171 604.4 327 88.4
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 9.6e-171 604.0 412 73.3
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 9.6e-171 604.0 341 83.9
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 2.1e-170 602.8 400 74.2
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 4.7e-170 601.7 341 83.3
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 4.7e-170 601.7 354 81.1
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.8e-169 599.7 357 79.8
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 5.2e-169 598.2 337 84.0
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 5.2e-169 598.2 348 82.2
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 2.0e-168 596.3 401 73.8
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 2.6e-168 595.9 361 79.8
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.6e-168 595.9 345 82.9
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 3.4e-168 595.5 405 73.1
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 5.8e-168 594.7 374 76.5
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 5.8e-168 594.7 353 81.6
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 7.6e-168 594.3 388 74.2
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.7e-167 593.2 366 78.1
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.7e-167 593.2 366 77.9
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 3.2e-166 589.0 403 71.7
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 4.2e-166 588.6 346 80.1
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 4.2e-166 588.6 371 74.9
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 5.4e-166 588.2 325 86.5
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 3.0e-164 582.4 346 78.3
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 5.1e-164 581.6 369 75.6
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 4.3e-163 578.6 358 76.0
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 2.8e-154 549.3 346 75.7
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 5.3e-153 545.0 314 82.5
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 5.3e-153 545.0 314 82.5
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.9e-148 528.9 362 73.5
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 1.2e-144 517.3 416 65.4
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 2.0e-144 516.5 338 71.9
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 4.9e-143 511.9 360 69.4
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 3.2e-142 509.2 330 71.5
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 5.5e-142 508.4 347 69.5
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.3e-140 503.1 400 65.0
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 4.1e-137 492.3 379 66.0
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 1.7e-135 486.9 355 65.6
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 6.9e-129 464.9 400 61.5
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 6.7e-124 448.4 298 75.2
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 1.3e-122 444.1 329 62.6
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 6.7e-116 421.8 287 72.1
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 2.0e-115 420.2 376 57.4
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 6.3e-114 415.2 287 71.8
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 4.1e-113 412.5 248 79.0
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 7.0e-113 411.8 288 70.8
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.3e-106 391.0 328 56.1
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 5.0e-103 379.0 327 57.5
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.7e-98 364.0 371 50.4
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 3.9e-71 273.1 287 47.4
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.9e-70 270.8 207 67.1
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 5.8e-67 259.2 190 69.5
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 7.6e-59 232.3 178 63.5
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 2.4e-52 210.7 179 61.5
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 2.4e-49 200.7 131 76.3
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 1.1e-14 85.5 90 51.1
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 1.1e-14 85.5 90 51.1
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 1.1e-14 85.5 59 74.6
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 5.0e-10 70.1 35 88.6


User provided reference genes

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