Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G561600 Prunus persica HOM05D008027 ORTHO05D009737 4.7e-35 150.6 73 100.0
Prupe.4G249100 Prunus persica HOM05D008027 ORTHO05D009737 2.5e-20 101.7 47 93.6
Thecc.02G042600 Theobroma cacao HOM05D008027 ORTHO05D009737 6.1e-19 97.1 67 68.7
Gohir.D04G171400 Gossypium hirsutum HOM05D008027 ORTHO05D009737 1.2e-17 92.8 67 65.7
Gohir.A04G126500 Gossypium hirsutum HOM05D008027 ORTHO05D009737 1.5e-17 92.4 67 65.7
Gorai.012G160300 Gossypium raimondii HOM05D008027 ORTHO05D009737 3.4e-17 91.3 67 64.2
MD15G1417600 Malus domestica HOM05D008027 ORTHO05D009737 2.2e-16 88.6 62 71.0
COL.COLO4_17908 Corchorus olitorius HOM05D008027 ORTHO05D009737 2.8e-16 88.2 75 61.3
CiPaw.05G041100 Carya illinoinensis HOM05D008027 ORTHO05D009737 1.8e-15 85.5 65 66.2
Cfa005561 Carpinus fangiana HOM05D008027 ORTHO05D009737 7.8e-14 80.1 62 64.5
Lj6g0012761 Lotus japonicus HOM05D008027 ORTHO05D009737 1.3e-13 79.3 68 57.4
QL07p009661 Quercus lobata HOM05D008027 ORTHO05D009737 5.0e-13 77.4 61 63.9
Lalb_Chr18g0060771 Lupinus albus HOM05D008027 ORTHO05D009737 8.6e-13 76.6 70 55.7
RcHm_v2.0_Chr7g0224551 Rosa chinensis HOM05D008027 ORTHO05D009737 8.6e-13 76.6 72 58.3
Sabra15G0135300 Salix brachista HOM05D008027 ORTHO05D009737 4.3e-12 74.3 68 54.4
Dinv24246 Davidia involucrata HOM05D008027 ORTHO05D009737 5.6e-12 73.9 68 51.5
Nitab4.5_0002684g0120 Nicotiana tabacum HOM05D011465 ORTHO05D009737 5.6e-12 73.9 72 47.2
Lsat_1_v5_gn_7_79741 Lactuca sativa HOM05D008027 ORTHO05D009737 9.5e-12 73.2 66 53.0
FvH4_5g30240 Fragaria vesca HOM05D008027 ORTHO05D009737 1.2e-11 72.8 69 56.5
FAN18G1531 Fragaria x ananassa HOM05D008027 ORTHO05D009737 1.2e-11 72.8 69 56.5
Sopen01g047250 Solanum pennellii HOM05D011465 ORTHO05D009737 1.6e-11 72.4 71 49.3
TPR.G19740 Trifolium pratense HOM05D008027 ORTHO05D009737 1.6e-11 72.4 70 51.4
TPR.G19754 Trifolium pratense HOM05D008027 ORTHO05D009737 1.6e-11 72.4 70 51.4
Medtr2g007950 Medicago truncatula HOM05D008027 ORTHO05D009737 8.0e-11 70.1 70 50.0
Sopen01g047210 Solanum pennellii HOM05D011465 ORTHO05D009737 8.0e-11 70.1 70 48.6
ClCG05G009870 Citrullus lanatus HOM05D008027 ORTHO05D009737 1.4e-10 69.3 62 54.8
FAN04G0864 Fragaria x ananassa HOM05D008027 ORTHO05D009737 2.3e-10 68.6 71 54.9
TWI14G0810 Tripterygium wilfordii HOM05D008027 ORTHO05D009737 2.3e-10 68.6 69 50.7
Solyc01g150164.1 Solanum lycopersicum HOM05D011465 ORTHO05D009737 3.1e-10 68.2 70 47.1
Cpa.g.sc2.39 Carica papaya HOM05D000028 ORTHO05D001343 6.8e-10 67.0 65 50.8
Psat0s5304g0040 Pisum sativum HOM05D008027 ORTHO05D009737 1.5e-09 65.9 67 49.3
Aa31LG7G9220 Aethionema arabicum HOM05D008027 ORTHO05D009737 2.6e-09 65.1 61 52.5
Peaxi162Scf01290g00250 Petunia axillaris HOM05D011465 ORTHO05D009737 2.6e-09 65.1 71 49.3
Sp1g22980 Schrenkiella parvula HOM05D008027 ORTHO05D009737 2.6e-09 65.1 60 48.3
BcaC01g01678 Brassica carinata HOM05D008027 ORTHO05D009737 3.4e-09 64.7 63 46.0
BolC3t19607H Brassica oleracea HOM05D008027 ORTHO05D009737 3.4e-09 64.7 63 46.0
Hma1.2p1_0557F.1_g178210 Hydrangea macrophylla HOM05D008027 ORTHO05D009737 3.4e-09 64.7 69 52.2
BraA08t34629Z Brassica rapa HOM05D008027 ORTHO05D009737 4.4e-09 64.3 63 46.0
Thhalv10009240m.g Eutrema salsugineum HOM05D008027 ORTHO05D009737 5.8e-09 63.9 62 46.8
PGSC0003DMG400029754 Solanum tuberosum HOM05D011465 ORTHO05D009737 7.5e-09 63.5 70 44.3
Sed0014181 Sechium edule HOM05D008027 ORTHO05D009737 9.8e-09 63.2 61 52.5
AL1G40080 Arabidopsis lyrata HOM05D008027 ORTHO05D009737 1.3e-08 62.8 59 45.8
BcaB03g12037 Brassica carinata HOM05D008027 ORTHO05D009737 1.3e-08 62.8 60 46.7
arahy.Tifrunner.gnm1.ann1.6UKJ3N Arachis hypogaea HOM05D008027 ORTHO05D009737 1.7e-08 62.4 69 50.7
arahy.Tifrunner.gnm1.ann1.70LJUW Arachis hypogaea HOM05D008027 ORTHO05D009737 1.7e-08 62.4 69 50.7
BcaC05g26480 Brassica carinata HOM05D008027 ORTHO05D009737 1.7e-08 62.4 57 47.4
Oeu018394.1 Olea europaea HOM05D008027 ORTHO05D009737 1.7e-08 62.4 59 50.8
BolC5t31257H Brassica oleracea HOM05D008027 ORTHO05D009737 2.2e-08 62.0 57 47.4
CARHR026260 Cardamine hirsuta HOM05D008027 ORTHO05D009737 2.2e-08 62.0 59 47.5
A09p39140 Brassica napus HOM05D008027 ORTHO05D009737 2.9e-08 61.6 60 45.0
BraA09t39413Z Brassica rapa HOM05D008027 ORTHO05D009737 2.9e-08 61.6 60 45.0
Migut.N01020 Erythranthe guttata HOM05D008027 ORTHO05D009737 2.9e-08 61.6 64 50.0
Atru.chr6.991 Acer truncatum HOM05D008027 ORTHO05D009737 3.7e-08 61.2 30 83.3
AT1G25275 Arabidopsis thaliana HOM05D008027 ORTHO05D009737 3.7e-08 61.2 59 45.8
PGSC0003DMG400029752 Solanum tuberosum HOM05D011465 ORTHO05D009737 3.7e-08 61.2 67 40.3
BcaC05g26684 Brassica carinata HOM05D008027 ORTHO05D009737 4.9e-08 60.8 57 47.4
Sopen01g047240 Solanum pennellii HOM05D011465 ORTHO05D009737 4.9e-08 60.8 71 40.8
CANSAT11G0026 Cannabis sativa HOM05D008027 ORTHO05D009737 6.4e-08 60.5 72 44.4
Carub.0001s2529 Capsella rubella HOM05D008027 ORTHO05D009737 6.4e-08 60.5 59 44.1
Glyma.15G049600 Glycine max HOM05D008027 ORTHO05D009737 6.4e-08 60.5 64 48.4
Manes.09G074900 Manihot esculenta HOM05D008027 ORTHO05D009737 6.4e-08 60.5 67 46.3
Potri.015G116800 Populus trichocarpa HOM05D008027 ORTHO05D009737 6.4e-08 60.5 65 50.8
C03p73120 Brassica napus HOM05D008027 ORTHO05D009737 8.3e-08 60.1 57 47.4
Solyc01g104720.3 Solanum lycopersicum HOM05D011465 ORTHO05D009737 8.3e-08 60.1 71 39.4
A08p26830 Brassica napus HOM05D008027 ORTHO05D009737 1.1e-07 59.7 57 47.4
C05p25230 Brassica napus HOM05D008027 ORTHO05D009737 1.4e-07 59.3 54 48.1
Glyma.08G183000 Glycine max HOM05D008027 ORTHO05D009737 2.4e-07 58.5 63 42.9
CAN.G257.116 Capsicum annuum HOM05D011465 ORTHO05D009737 1.6e-06 55.8 64 45.3
CsaV3_3G018720 Cucumis sativus L. HOM05D008027 ORTHO05D009737 7.8e-06 53.5 60 50.0
Nn5g28740 Nelumbo nucifera HOM05D008027 ORTHO05D009737 7.8e-06 53.5 57 52.6
PGSC0003DMG400029751 Solanum tuberosum HOM05D011465 ORTHO05D009737 7.8e-06 53.5 54 44.4


User provided reference genes

Program Settings