Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 7.5e-312 1072.8 549 100.0
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 4.1e-224 781.6 554 74.7
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 1.2e-178 630.6 552 64.7
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.7e-177 625.5 549 63.0
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.6e-175 618.6 549 62.7
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.9e-174 615.5 549 62.1
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 1.5e-173 613.6 549 62.8
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.7e-172 608.6 549 62.5
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 9.9e-154 547.7 553 55.3
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 5.8e-146 521.9 552 54.0
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 1.6e-140 503.8 545 53.2
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 4.2e-136 489.2 547 53.2
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 8.1e-132 474.9 556 48.9
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 4.5e-130 469.2 552 51.3
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 4.2e-128 462.6 554 50.7
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 9.3e-128 461.5 516 52.9
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 3.7e-124 449.5 534 50.7
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 7.6e-122 441.8 546 48.7
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.7e-121 440.7 551 47.4
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 1.7e-121 440.7 551 46.3
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 4.9e-121 439.1 549 47.7
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 6.5e-121 438.7 554 50.0
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 5.5e-120 435.6 552 50.0
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 1.2e-119 434.5 564 46.5
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 6.1e-119 432.2 557 46.5
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 8.7e-118 428.3 549 45.4
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.5e-117 427.6 554 46.9
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 2.8e-116 423.3 547 47.7
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 1.4e-115 421.0 551 47.9
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.8e-115 420.6 556 46.4
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 4.1e-115 419.5 554 46.4
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 2.7e-111 406.8 553 46.3
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 3.7e-108 396.4 546 45.4
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 1.5e-106 391.0 545 44.4
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 2.2e-105 387.1 471 48.8
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 6.5e-105 385.6 552 44.0
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.4e-104 384.4 547 44.2
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 7.7e-98 362.1 542 43.2
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 2.9e-97 360.1 484 47.1
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 6.1e-95 352.4 540 41.7
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 1.0e-94 351.7 547 41.1
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 2.0e-93 347.4 553 39.4
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 3.3e-93 346.7 545 41.7
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 3.3e-93 346.7 560 40.5
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 5.7e-93 345.9 559 40.4
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 2.8e-92 343.6 543 41.3
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 6.3e-92 342.4 545 41.5
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 6.3e-92 342.4 541 41.6
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 8.2e-92 342.0 540 41.9
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 3.1e-91 340.1 548 41.2
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 5.3e-91 339.3 544 41.0
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.2e-89 334.0 548 41.4
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 2.9e-89 333.6 549 39.5
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 5.5e-88 329.3 552 40.4
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.2e-87 328.2 552 38.0
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 1.0e-86 325.1 540 39.8
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 1.4e-86 324.7 549 39.3
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.2e-85 321.6 548 38.0
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 2.2e-84 317.4 439 44.9
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 3.1e-83 313.5 549 37.7
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 1.0e-81 308.5 552 38.0
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 8.5e-81 305.4 554 38.4
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 4.2e-80 303.1 544 37.5
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 3.6e-79 300.1 567 37.2
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 2.3e-78 297.4 561 37.6
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 3.0e-78 297.0 558 38.0
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 4.0e-78 296.6 545 37.2
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 2.2e-76 290.8 544 37.3
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 5.4e-75 286.2 540 38.7
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 1.0e-73 282.0 509 36.9
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 2.3e-73 280.8 594 35.2
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 4.2e-72 276.6 540 36.7
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 1.2e-71 275.0 547 36.7
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 2.1e-71 274.2 557 35.9
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 8.0e-71 272.3 547 36.6
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 8.0e-71 272.3 547 36.6
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 1.4e-70 271.6 547 36.0
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 3.0e-70 270.4 552 35.9
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 6.3e-68 262.7 524 36.8
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 6.3e-68 262.7 523 36.9
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 7.0e-67 259.2 538 36.1
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 9.2e-67 258.8 524 36.8
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 5.0e-65 253.1 561 35.5
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 4.7e-63 246.5 413 39.5
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.0e-61 241.1 442 38.0
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 7.5e-61 239.2 540 34.3
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 1.0e-57 228.8 510 34.9
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 1.2e-55 221.9 534 31.3
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 2.3e-54 217.6 546 33.3
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 3.7e-52 210.3 547 32.9
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 6.4e-52 209.5 537 34.8
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 1.2e-50 205.3 531 32.2
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 7.8e-50 202.6 490 34.3
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 2.3e-49 201.1 540 32.4
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 8.9e-46 189.1 424 34.7
Prupe.8G015600 Prunus persica HOM05D025481 ORTHO05D007911 5.4e-43 179.9 310 41.6
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.7e-41 174.9 391 33.8
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 3.5e-34 150.6 335 33.7
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 2.5e-32 144.4 155 49.0
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 2.0e-29 134.8 230 40.0
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 2.7e-26 124.4 145 55.9
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 8.1e-23 112.8 154 44.2
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 7.6e-21 106.3 574 23.7
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 2.2e-20 104.8 513 25.3
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 8.4e-20 102.8 488 25.6
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 2.7e-18 97.8 103 49.5
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 2.3e-17 94.7 169 41.4
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 8.7e-17 92.8 122 45.1
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 1.5e-16 92.0 123 47.2
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 4.2e-11 73.9 134 39.6
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 1.3e-07 62.4 90 40.0
Aqoxy1G01188 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 2.4e-06 58.2 115 35.7


User provided reference genes

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