Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G527300 Prunus persica HOM05D007577 ORTHO05D002366 1.5e-93 346.3 194 100.0
MD08G1192700 Malus domestica HOM05D007577 ORTHO05D002366 1.2e-48 197.2 185 70.3
MD15G1381100 Malus domestica HOM05D007577 ORTHO05D002366 9.8e-48 194.1 185 67.6
FAN08G0887 Fragaria x ananassa HOM05D007577 ORTHO05D002366 5.2e-41 171.8 185 58.9
FvH4_5g35850 Fragaria vesca HOM05D007577 ORTHO05D002366 1.2e-40 170.6 185 58.4
FAN18G2443 Fragaria x ananassa HOM05D007577 ORTHO05D002366 2.6e-40 169.5 185 57.8
FAN04G3208 Fragaria x ananassa HOM05D007577 ORTHO05D002366 3.7e-39 165.6 185 57.8
RcHm_v2.0_Chr7g0237581 Rosa chinensis HOM05D007577 ORTHO05D002366 8.1e-34 147.9 185 53.5
Thecc.08G067500 Theobroma cacao HOM05D007577 ORTHO05D002366 8.6e-28 127.9 179 50.8
Manes.02G147100 Manihot esculenta HOM05D007577 ORTHO05D002366 3.6e-26 122.5 177 46.9
QL09p017111 Quercus lobata HOM05D007577 ORTHO05D002366 1.4e-25 120.6 177 45.8
CANSAT25G2895 Cannabis sativa HOM05D007577 ORTHO05D002366 4.0e-25 119.0 182 50.0
Peaxi162Scf00281g00079 Petunia axillaris HOM05D007577 ORTHO05D002366 6.8e-25 118.2 178 48.3
Duzib041G0196 Durio zibethinus HOM05D007577 ORTHO05D002366 8.9e-25 117.9 181 45.3
Phvul.008G179400 Phaseolus vulgaris HOM05D007577 ORTHO05D002366 2.0e-24 116.7 177 48.0
COL.COLO4_35193 Corchorus olitorius HOM05D007577 ORTHO05D002366 5.8e-24 115.2 183 48.6
Haze_22347 Corylus avellana HOM05D007577 ORTHO05D002366 2.9e-23 112.8 177 51.4
Sabra05G0120900 Salix brachista HOM05D007577 ORTHO05D002366 3.8e-23 112.5 181 45.9
Potri.005G158400 Populus trichocarpa HOM05D007577 ORTHO05D002366 1.4e-22 110.5 177 46.3
VMungo0647G2546 Vigna mungo HOM05D007577 ORTHO05D002366 1.4e-22 110.5 181 47.0
Glyma.02G212100 Glycine max HOM05D007577 ORTHO05D002366 3.2e-22 109.4 178 46.6
Nitab4.5_0001507g0070 Nicotiana tabacum HOM05D007577 ORTHO05D002366 4.1e-22 109.0 179 45.3
Manes.18G061400 Manihot esculenta HOM05D007577 ORTHO05D002366 3.5e-21 105.9 177 41.8
vmacro21310 Vaccinium macrocarpon HOM05D007577 ORTHO05D002366 4.6e-21 105.5 180 45.0
Actinidia10365 Actinidia chinensis HOM05D007577 ORTHO05D002366 6.0e-21 105.1 183 45.9
Solyc04g076010.3 Solanum lycopersicum HOM05D007577 ORTHO05D002366 7.8e-21 104.8 185 42.2
Nitab4.5_0006922g0010 Nicotiana tabacum HOM05D007577 ORTHO05D002366 6.6e-20 101.7 181 43.6
Lalb_Chr04g0253001 Lupinus albus HOM05D007577 ORTHO05D002366 8.6e-20 101.3 177 45.2
CiPaw.07G168400 Carya illinoinensis HOM05D007577 ORTHO05D002366 1.9e-19 100.1 185 43.8
CiPaw.08G053900 Carya illinoinensis HOM05D007577 ORTHO05D002366 1.9e-19 100.1 177 42.4
Gohir.A02G077300 Gossypium hirsutum HOM05D007577 ORTHO05D002366 5.6e-19 98.6 181 42.0
Gohir.D05G224200 Gossypium hirsutum HOM05D007577 ORTHO05D002366 7.3e-19 98.2 179 42.5
Lalb_Chr10g0102661 Lupinus albus HOM05D007577 ORTHO05D002366 9.6e-19 97.8 177 42.9
Medtr5g065350 Medicago truncatula HOM05D007577 ORTHO05D002366 1.2e-18 97.4 180 45.0
Gorai.009G231700 Gossypium raimondii HOM05D007577 ORTHO05D002366 1.6e-18 97.1 179 42.5
Gohir.A05G221500 Gossypium hirsutum HOM05D007577 ORTHO05D002366 2.8e-18 96.3 180 43.3
TAR376G0287 Trochodendron aralioides HOM05D007577 ORTHO05D002366 2.8e-18 96.3 180 40.6
Glyma.14G179800 Glycine max HOM05D007577 ORTHO05D002366 1.4e-17 94.0 178 41.6
PGR042G1402 Punica granatum HOM05D007577 ORTHO05D002366 3.1e-17 92.8 202 39.6
Duzib093G2023 Durio zibethinus HOM05D007577 ORTHO05D002366 1.2e-16 90.9 178 39.9
Rhsim06G0074200 Rhododendron simsii HOM05D004661 ORTHO05D005827 2.0e-16 90.1 181 39.8
Lalb_Chr17g0344401 Lupinus albus HOM05D007577 ORTHO05D002366 4.4e-16 89.0 184 43.5
LjContig00408g0001347 Lotus japonicus HOM05D007577 ORTHO05D002366 7.6e-16 88.2 185 40.5
arahy.Tifrunner.gnm1.ann1.15IZES Arachis hypogaea HOM05D007577 ORTHO05D002366 2.9e-15 86.3 178 43.8
CSS0010517 Camellia sinensis var. sinensis HOM05D007577 ORTHO05D002366 2.9e-15 86.3 181 40.3
Hund27003 Selenicereus undatus HOM05D007577 ORTHO05D002366 4.9e-15 85.5 190 38.4
Eucgr.F00405 Eucalyptus grandis HOM05D007577 ORTHO05D002366 1.1e-14 84.3 185 37.3
Cpa.g.sc608.1 Carica papaya HOM05D007577 ORTHO05D002366 2.4e-14 83.2 201 39.3
MBI06_g18795_MAGBIO Magnolia biondii HOM05D007577 ORTHO05D002366 2.4e-14 83.2 180 37.8
Oeu043942.1 Olea europaea HOM05D007577 ORTHO05D002366 2.4e-14 83.2 182 37.9
Sed0013944 Sechium edule HOM05D007577 ORTHO05D002366 5.4e-14 82.0 178 38.2
ClCG08G011490 Citrullus lanatus HOM05D007577 ORTHO05D002366 7.1e-14 81.6 173 39.3
Gohir.D02G084600 Gossypium hirsutum HOM05D007577 ORTHO05D002366 7.1e-14 81.6 177 38.4
Atru.chr13.1051 Acer truncatum HOM05D007577 ORTHO05D002366 1.2e-13 80.9 192 36.5
Duzib116G0880 Durio zibethinus HOM05D007577 ORTHO05D002366 1.2e-13 80.9 169 39.1
Lsat_1_v5_gn_1_2280 Lactuca sativa HOM05D007577 ORTHO05D002366 1.2e-13 80.9 191 38.7
MSTRG.24626 Avicennia marina HOM05D007577 ORTHO05D002366 1.6e-13 80.5 178 38.2
Gorai.005G095300 Gossypium raimondii HOM05D007577 ORTHO05D002366 1.6e-13 80.5 177 37.9
TWI12G1315 Tripterygium wilfordii HOM05D007577 ORTHO05D002366 1.6e-13 80.5 180 36.1
Sed0009750 Sechium edule HOM05D007577 ORTHO05D002366 4.6e-13 79.0 177 36.7
TPR.G20891 Trifolium pratense HOM05D007577 ORTHO05D002366 4.6e-13 79.0 186 40.3
EL10Ac1g01102 Beta vulgaris HOM05D007577 ORTHO05D002366 6.0e-13 78.6 216 33.8
TAR625G1503 Trochodendron aralioides HOM05D007577 ORTHO05D002366 5.1e-12 75.5 175 37.1
Psat0s2495g0040 Pisum sativum HOM05D007577 ORTHO05D002366 8.7e-12 74.7 182 39.0
PGR031G3996 Punica granatum HOM05D007577 ORTHO05D002366 1.5e-11 73.9 178 36.5
Cc10_g15550 Coffea canephora HOM05D007577 ORTHO05D002366 1.9e-11 73.6 185 36.8
MELO3C011066.2 Cucumis melo HOM05D007577 ORTHO05D002366 3.3e-11 72.8 177 39.0
TWI56G0426 Tripterygium wilfordii HOM05D007577 ORTHO05D002366 7.3e-11 71.6 170 34.7
CsaV3_2G030080 Cucumis sativus L. HOM05D007577 ORTHO05D002366 9.6e-11 71.2 177 39.5
Migut.N00361 Erythranthe guttata HOM05D007577 ORTHO05D002366 1.3e-10 70.9 177 35.0
Sc23g0000570 Simmondsia chinensis HOM05D007577 ORTHO05D002366 1.3e-10 70.9 178 32.0
arahy.Tifrunner.gnm1.ann1.MEQI9D Arachis hypogaea HOM05D007577 ORTHO05D002366 3.6e-10 69.3 178 39.3
TAR628G0666 Trochodendron aralioides HOM05D007577 ORTHO05D002366 3.1e-09 66.2 161 36.6
Dinv44835 Davidia involucrata HOM05D007577 ORTHO05D002366 5.3e-09 65.5 97 43.3
HanXRQChr04g0108601 Helianthus annuus HOM05D007577 ORTHO05D002366 6.9e-09 65.1 166 34.3
ATR0022G018 Amborella trichopoda HOM05D007577 ORTHO05D002366 2.0e-08 63.5 183 33.9
SalBow3G1297 Salvia bowleyana HOM05D007577 ORTHO05D002366 3.4e-08 62.8 177 31.6
Ciclev10002010m.g Citrus clementina HOM05D007577 ORTHO05D002366 2.9e-07 59.7 195 33.3
Sc26g0000220 Simmondsia chinensis HOM05D007577 ORTHO05D002366 3.8e-07 59.3 175 33.1
Nn1g05500 Nelumbo nucifera HOM05D007577 ORTHO05D002366 1.1e-06 57.8 164 32.3
Actinidia30808 Actinidia chinensis HOM05D007577 ORTHO05D002366 2.4e-06 56.6 54 51.9


User provided reference genes

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