Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 5.5e-42 174.1 102 100.0
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 8.8e-40 166.8 102 95.1
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 8.8e-40 166.8 102 96.1
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 8.8e-40 166.8 102 95.1
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.2e-38 162.2 102 76.5
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.8e-38 161.8 103 88.3
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 2.8e-38 161.8 102 76.5
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 3.7e-38 161.4 102 76.5
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.7e-38 161.4 102 80.4
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 6.3e-38 160.6 101 90.1
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 6.3e-38 160.6 102 85.3
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.8e-37 159.1 102 79.4
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 4.1e-37 157.9 102 76.5
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 4.1e-37 157.9 102 76.5
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 5.3e-37 157.5 102 77.5
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 5.3e-37 157.5 102 77.5
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 7.0e-37 157.1 97 94.8
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 9.1e-37 156.8 104 80.8
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 9.1e-37 156.8 102 79.4
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 2.0e-36 155.6 95 91.6
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 3.5e-36 154.8 102 78.4
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 4.5e-36 154.5 101 74.3
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.3e-35 152.9 112 79.5
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.3e-35 152.9 104 84.6
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 1.7e-35 152.5 102 76.5
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 2.2e-35 152.1 102 75.5
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 2.9e-35 151.8 102 81.4
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 3.8e-35 151.4 103 76.7
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.8e-35 151.4 103 77.7
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 5.0e-35 151.0 104 77.9
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 6.5e-35 150.6 94 85.1
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 6.5e-35 150.6 103 77.7
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 8.5e-35 150.2 112 70.5
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 8.5e-35 150.2 112 70.5
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 8.5e-35 150.2 96 76.0
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 8.5e-35 150.2 103 82.5
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.5e-34 149.4 103 73.8
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 1.9e-34 149.1 110 77.3
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 2.5e-34 148.7 96 81.2
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 2.5e-34 148.7 101 81.2
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 3.2e-34 148.3 102 74.5
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.2e-34 148.3 96 78.1
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 5.5e-34 147.5 103 71.8
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 9.4e-34 146.7 108 75.9
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 9.4e-34 146.7 101 73.3
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 9.4e-34 146.7 106 86.8
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.6e-33 146.0 103 76.7
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.6e-33 146.0 103 78.6
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 2.1e-33 145.6 101 72.3
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 4.7e-33 144.4 101 73.3
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 8.0e-33 143.7 111 77.5
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 8.0e-33 143.7 101 74.3
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.0e-32 143.3 95 73.7
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.0e-32 143.3 95 73.7
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 1.4e-32 142.9 101 82.2
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 1.8e-32 142.5 111 76.6
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 2.3e-32 142.1 107 72.9
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 3.0e-32 141.7 114 74.6
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 6.8e-32 140.6 102 75.5
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 6.8e-32 140.6 100 80.0
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.5e-31 139.4 101 78.2
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 1.5e-31 139.4 103 71.8
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.0e-31 139.0 108 75.9
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 2.6e-31 138.7 107 77.6
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 3.4e-31 138.3 103 83.5
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 3.4e-31 138.3 103 83.5
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 5.7e-31 137.5 113 67.3
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 7.5e-31 137.1 103 73.8
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 7.5e-31 137.1 96 75.0
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 9.8e-31 136.7 94 81.9
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.3e-30 136.3 107 66.4
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.3e-30 136.3 109 77.1
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 8.3e-30 133.7 111 75.7
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.4e-29 132.9 91 73.6
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 2.4e-29 132.1 109 65.1
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 3.1e-29 131.7 98 67.3
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 4.1e-29 131.3 105 64.8
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 5.4e-29 131.0 89 89.9
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 7.0e-29 130.6 105 65.7
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 9.1e-29 130.2 106 70.8
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 1.6e-28 129.4 106 73.6
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.6e-28 129.4 115 68.7
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 2.0e-28 129.0 105 68.6
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 2.0e-28 129.0 113 69.0
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 2.0e-28 129.0 113 69.0
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 2.0e-28 129.0 107 72.0
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 2.7e-28 128.6 114 68.4
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 4.5e-28 127.9 86 80.2
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.0e-27 126.7 89 82.0
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 1.3e-27 126.3 109 62.4
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.7e-27 125.9 116 61.2
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.5e-26 122.9 101 65.3
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.9e-26 122.5 64 90.6
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 5.5e-26 120.9 101 57.4
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 7.2e-26 120.6 114 71.1
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 9.5e-26 120.2 107 68.2
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 9.5e-26 120.2 107 68.2
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 1.2e-25 119.8 112 69.6
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.6e-25 119.4 109 74.3
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 2.1e-25 119.0 114 67.5
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 3.6e-25 118.2 108 72.2
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 6.1e-25 117.5 106 67.9
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 6.1e-25 117.5 101 68.3
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 8.0e-25 117.1 85 70.6
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.3e-24 115.5 78 93.6
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 8.9e-24 113.6 112 63.4
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 2.0e-23 112.5 112 67.0
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.8e-22 108.6 63 82.5
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 2.3e-19 99.0 101 58.4
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 3.6e-17 91.7 58 72.4
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 3.6e-17 91.7 64 75.0
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 3.7e-14 81.6 82 59.8
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.4e-13 79.0 70 75.7
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 4.1e-13 78.2 115 52.2
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 9.2e-13 77.0 94 48.9
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.2e-12 76.6 101 53.5
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 1.5e-10 69.7 100 49.0
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 7.3e-10 67.4 103 53.4
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 1.4e-08 63.2 57 63.2
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 9.8e-07 57.0 55 76.4
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 9.8e-07 57.0 50 68.0
MCO12G274 Micromonas commoda HOM05D006768 ORTHO05D008436 6.4e-06 54.3 106 48.1


User provided reference genes

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