Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 1.3e-63 246.1 112 100.0
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 2.3e-57 225.3 110 89.1
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 4.2e-51 204.5 111 81.1
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 2.7e-50 201.8 112 81.2
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.0e-49 199.9 112 81.2
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 1.0e-49 199.9 112 77.7
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 2.3e-49 198.7 112 78.6
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 1.1e-48 196.4 114 78.9
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 8.2e-47 190.3 112 72.3
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 9.0e-46 186.8 113 71.7
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.2e-45 186.4 114 71.9
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 2.6e-45 185.3 112 72.3
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 2.6e-45 185.3 112 72.3
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 4.5e-45 184.5 112 72.3
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 7.6e-45 183.7 112 70.5
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 2.2e-44 182.2 112 69.6
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 2.2e-44 182.2 113 69.0
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 1.9e-43 179.1 112 68.8
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 2.5e-43 178.7 112 68.8
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 3.2e-43 178.3 112 71.4
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 4.6e-42 174.5 101 73.3
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.3e-41 172.9 112 68.8
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 2.3e-41 172.2 101 72.3
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 2.3e-41 172.2 112 66.1
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 2.3e-41 172.2 112 67.0
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 3.9e-41 171.4 112 67.0
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 3.9e-41 171.4 112 67.9
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 5.1e-41 171.0 111 65.8
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 5.1e-41 171.0 112 62.5
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 6.7e-41 170.6 112 67.0
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 8.7e-41 170.2 112 67.0
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 1.5e-40 169.5 112 67.0
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 1.9e-40 169.1 112 64.3
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 3.3e-40 168.3 112 67.0
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 3.3e-40 168.3 112 65.2
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 5.7e-40 167.5 112 64.3
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 5.7e-40 167.5 114 67.5
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 7.4e-40 167.2 103 69.9
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 7.4e-40 167.2 111 67.6
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 9.7e-40 166.8 112 66.1
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 9.7e-40 166.8 112 66.1
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 1.7e-39 166.0 112 67.9
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 2.8e-39 165.2 112 65.2
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 3.7e-39 164.9 117 63.2
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 4.8e-39 164.5 112 66.1
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 4.8e-39 164.5 112 66.1
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 6.3e-39 164.1 112 65.2
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 8.2e-39 163.7 112 60.7
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 8.2e-39 163.7 119 63.0
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 8.2e-39 163.7 112 64.3
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 2.4e-38 162.2 112 65.2
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 3.1e-38 161.8 112 64.3
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 4.1e-38 161.4 112 67.9
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 5.3e-38 161.0 112 64.3
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 6.9e-38 160.6 112 65.2
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 1.2e-37 159.8 112 64.3
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 1.2e-37 159.8 112 64.3
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 1.2e-37 159.8 112 65.2
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 1.5e-37 159.5 112 59.8
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 2.0e-37 159.1 112 64.3
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 2.0e-37 159.1 112 63.4
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 2.6e-37 158.7 108 66.7
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 3.4e-37 158.3 112 67.0
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 3.4e-37 158.3 112 67.0
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 3.4e-37 158.3 118 60.2
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 4.5e-37 157.9 112 64.3
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 1.3e-36 156.4 115 57.4
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 2.2e-36 155.6 120 60.0
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 2.9e-36 155.2 115 60.0
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 5.0e-36 154.5 112 61.6
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 8.5e-36 153.7 112 58.9
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 8.5e-36 153.7 112 58.9
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.1e-35 153.3 105 61.9
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 1.1e-35 153.3 112 55.4
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 1.1e-35 153.3 115 59.1
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 3.0e-33 145.2 114 55.3
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 6.7e-33 144.1 106 61.3
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 3.3e-32 141.7 112 56.2
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 5.7e-32 141.0 100 66.0
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 7.4e-32 140.6 106 60.4
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 1.1e-30 136.7 121 52.1
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 6.9e-30 134.0 98 54.1
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 1.3e-28 129.8 112 54.5
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.6e-26 122.9 111 50.5
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 4.7e-26 121.3 111 49.5
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 6.7e-25 117.5 113 49.6
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.1e-22 110.2 71 63.4
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 4.2e-19 98.2 121 38.8
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.2e-18 96.7 82 53.7
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 1.6e-18 96.3 124 37.1
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 9.4e-11 70.5 68 45.6
Aqoxy6G00222 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.2e-10 70.1 73 45.2
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 2.7e-10 68.9 112 39.3
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 6.1e-10 67.8 67 47.8
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 6.8e-09 64.3 35 74.3
Nn1g02485 Nelumbo nucifera HOM05D007582 ORTHO05D009645 7.5e-08 60.8 71 46.5


User provided reference genes

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