Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G486000 Prunus persica HOM05D019695 ORTHO05D022679 1.5e-156 556.2 298 100.0
FAN24G2106 Fragaria x ananassa HOM05D019695 ORTHO05D022679 5.6e-34 149.1 224 47.8
FAN27G0582 Fragaria x ananassa HOM05D019695 ORTHO05D022679 9.5e-34 148.3 197 51.8
FAN20G0523 Fragaria x ananassa HOM05D019695 ORTHO05D022679 2.8e-33 146.7 197 51.3
FvH4_2g28320 Fragaria vesca HOM05D019695 ORTHO05D022679 3.6e-33 146.4 197 51.3
FAN15G0756 Fragaria x ananassa HOM05D019695 ORTHO05D022679 2.4e-29 133.7 186 50.0
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 1.7e-11 74.3 103 52.4
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 1.1e-10 71.6 149 43.0
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 2.5e-10 70.5 123 39.8
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 4.3e-10 69.7 145 40.7
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 1.2e-09 68.2 103 50.5
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 2.1e-09 67.4 135 42.2
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 2.8e-09 67.0 91 45.1
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 4.7e-09 66.2 113 44.2
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 4.7e-09 66.2 121 39.7
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 6.2e-09 65.9 69 52.2
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 2.3e-08 63.9 124 40.3
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 3.1e-08 63.5 121 40.5
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 3.1e-08 63.5 133 42.1
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 3.1e-08 63.5 159 35.8
Gohir.D07G034000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 5.2e-08 62.8 117 42.7
Gorai.001G035600 Gossypium raimondii HOM05D003969 ORTHO05D003125 5.2e-08 62.8 117 42.7
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 6.8e-08 62.4 127 39.4
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 8.9e-08 62.0 130 40.0
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 8.9e-08 62.0 141 36.2
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 1.2e-07 61.6 110 40.9
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 2.6e-07 60.5 102 44.1
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.6e-07 60.5 121 38.8
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.4e-07 59.7 132 40.9
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 5.8e-07 59.3 120 38.3
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 5.8e-07 59.3 134 42.5
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 7.6e-07 58.9 115 36.5
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 7.6e-07 58.9 86 43.0
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 7.6e-07 58.9 129 34.1
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 7.6e-07 58.9 129 34.1
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 7.6e-07 58.9 76 50.0
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 9.9e-07 58.5 58 53.4
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 9.9e-07 58.5 130 38.5
Sc23g0006550 Simmondsia chinensis HOM05D003969 ORTHO05D003125 9.9e-07 58.5 97 40.2
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 9.9e-07 58.5 116 41.4
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.3e-06 58.2 71 52.1
Gohir.D05G059000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.7e-06 57.8 96 37.5
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 1.7e-06 57.8 71 47.9
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 1.7e-06 57.8 133 36.8
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 1.7e-06 57.8 143 37.1
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.7e-06 57.8 132 40.9
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 2.2e-06 57.4 71 52.1
Gohir.A07G030200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.2e-06 57.4 77 46.8
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 3.8e-06 56.6 117 39.3
Gorai.009G060100 Gossypium raimondii HOM05D003969 ORTHO05D003125 3.8e-06 56.6 96 36.5
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 4.9e-06 56.2 118 37.3
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 6.4e-06 55.8 62 56.5
Eucgr.C01640 Eucalyptus grandis HOM05D003969 ORTHO05D003125 8.4e-06 55.5 71 50.7


User provided reference genes

Program Settings