Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 1.8e-159 565.8 279 100.0
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 3.9e-146 521.5 274 92.7
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 5.0e-146 521.2 274 91.2
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 2.1e-144 515.8 274 91.2
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.1e-144 515.8 274 91.2
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.7e-144 514.6 275 90.2
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 4.7e-144 514.6 274 92.0
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 8.0e-144 513.8 274 90.9
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 2.9e-141 505.4 274 88.3
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.1e-140 503.4 274 88.0
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 3.2e-140 501.9 273 88.3
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 3.2e-140 501.9 274 87.6
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 7.0e-140 500.7 273 89.4
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.2e-139 500.0 275 86.9
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 2.0e-139 499.2 273 86.1
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 2.7e-139 498.8 270 88.9
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 6.0e-139 497.7 274 87.6
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 7.8e-139 497.3 274 88.0
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.0e-138 496.9 274 89.1
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 1.7e-138 496.1 274 88.0
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.7e-138 496.1 274 87.2
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 2.3e-138 495.7 274 86.5
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 2.3e-138 495.7 274 86.5
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 2.3e-138 495.7 272 86.8
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 3.0e-138 495.4 272 86.8
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 3.0e-138 495.4 274 85.8
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 5.0e-138 494.6 274 87.2
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 6.6e-138 494.2 275 86.2
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.5e-137 492.3 274 87.2
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.5e-137 492.3 274 87.2
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 4.3e-137 491.5 274 85.8
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 5.6e-137 491.1 273 85.3
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 7.3e-137 490.7 274 84.7
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 7.3e-137 490.7 272 84.9
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.2e-136 490.0 273 86.8
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.2e-136 490.0 272 85.7
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.6e-136 489.6 272 86.8
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 2.1e-136 489.2 273 86.1
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.8e-136 488.8 273 86.4
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 2.8e-136 488.8 275 84.7
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 4.7e-136 488.0 275 85.1
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 6.2e-136 487.6 274 86.5
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 8.1e-136 487.3 271 85.6
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 1.1e-135 486.9 273 84.2
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 1.1e-135 486.9 273 84.2
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.4e-135 486.5 268 87.3
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.4e-135 486.5 268 87.3
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.8e-135 486.1 303 78.5
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.8e-135 486.1 273 86.1
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 2.3e-135 485.7 273 83.9
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 2.3e-135 485.7 273 83.9
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 3.1e-135 485.3 273 83.9
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 3.1e-135 485.3 273 85.3
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 4.0e-135 485.0 272 83.8
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 6.8e-135 484.2 276 85.1
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 8.9e-135 483.8 272 83.5
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 8.9e-135 483.8 274 84.7
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.2e-134 483.4 274 85.0
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 2.0e-134 482.6 272 84.2
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.6e-134 482.3 271 86.0
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 2.6e-134 482.3 272 84.6
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 5.8e-134 481.1 273 83.5
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 1.7e-133 479.6 274 83.9
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 2.2e-133 479.2 273 82.4
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 2.2e-133 479.2 272 84.9
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 2.9e-133 478.8 271 85.2
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 3.7e-133 478.4 273 82.4
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 4.9e-133 478.0 271 83.4
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 6.4e-133 477.6 274 84.3
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 8.3e-133 477.2 273 82.1
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 1.1e-132 476.9 273 82.4
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.1e-132 476.9 274 83.9
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.4e-132 476.5 271 83.0
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.4e-132 476.5 316 76.3
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.4e-132 476.5 272 84.2
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.9e-132 476.1 272 84.9
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 2.4e-132 475.7 271 83.8
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 3.2e-132 475.3 271 84.1
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 2.1e-131 472.6 273 82.1
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 2.7e-131 472.2 273 81.7
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 3.5e-131 471.9 270 83.3
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 4.6e-131 471.5 272 81.6
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 7.8e-131 470.7 273 81.7
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.7e-130 469.5 274 81.8
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 2.3e-130 469.2 261 84.7
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 6.6e-130 467.6 272 81.2
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 8.6e-130 467.2 273 80.2
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 8.6e-130 467.2 273 80.2
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 8.6e-130 467.2 268 84.0
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 1.5e-129 466.5 274 81.4
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 3.3e-129 465.3 273 82.4
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 4.3e-129 464.9 274 81.8
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.2e-128 463.4 273 81.3
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 2.1e-128 462.6 273 79.5
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 2.1e-128 462.6 273 79.5
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 2.8e-128 462.2 273 80.6
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 4.7e-128 461.5 274 82.5
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 4.7e-128 461.5 275 78.9
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 8.1e-128 460.7 268 80.2
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 3.1e-127 458.8 274 81.4
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 4.0e-127 458.4 268 82.1
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 5.2e-127 458.0 272 80.1
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 4.4e-126 454.9 271 80.1
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 2.1e-123 446.0 275 77.1
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 2.7e-123 445.7 272 77.2
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 4.6e-123 444.9 315 68.6
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 8.6e-122 440.7 274 80.3
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 5.2e-119 431.4 233 86.7
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.5e-118 429.9 274 78.1
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 5.8e-118 427.9 273 76.6
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 3.5e-115 418.7 274 72.3
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 3.5e-115 418.7 279 69.9
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.5e-113 413.3 274 75.2
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.9e-113 412.9 275 70.9
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 3.6e-112 408.7 268 71.3
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 9.9e-110 400.6 268 69.8
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.5e-102 376.7 223 79.8
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 3.8e-101 372.1 267 65.2
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 5.6e-97 358.2 308 62.7
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 9.0e-87 324.3 183 84.7
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 3.4e-86 322.4 191 80.1
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 4.6e-83 312.0 186 80.6
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 2.2e-80 303.1 173 83.2
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 1.3e-77 293.9 271 52.4
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 5.5e-76 288.5 278 53.6
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 8.2e-72 274.6 282 51.8
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 2.2e-69 266.5 175 72.6
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.3e-64 250.8 277 44.8
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.3e-57 226.1 224 56.2
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.4e-55 220.7 224 55.4
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 3.2e-52 209.5 155 71.0
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.2e-51 207.6 294 43.5
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.4e-47 192.2 101 90.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 9.1e-47 191.4 102 88.2
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.5e-44 182.2 96 89.6
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 5.0e-37 159.1 88 84.1
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 7.8e-30 135.2 76 84.2
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.5e-25 120.9 96 67.7
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.3e-24 117.9 164 43.3
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.6e-11 74.3 40 95.0
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 2.6e-09 67.0 51 58.8


User provided reference genes

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