Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 2.0e-277 959.1 789 100.0
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.1e-169 601.3 781 70.6
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 6.0e-160 568.9 781 64.3
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.3e-158 562.8 781 60.2
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.1e-156 556.6 781 62.6
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.8e-155 552.4 782 63.6
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.5e-150 537.7 782 64.5
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 1.1e-132 478.4 779 59.7
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 3.2e-129 466.8 772 56.5
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 5.8e-123 446.0 772 54.9
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 2.5e-118 430.6 772 59.6
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.6e-117 427.9 777 56.8
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.3e-114 418.3 772 54.4
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 6.4e-114 416.0 772 55.1
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 3.2e-105 387.1 772 55.3
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 7.9e-104 382.5 792 47.2
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 3.7e-101 373.6 772 53.6
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 1.8e-100 371.3 773 49.4
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 2.6e-99 367.5 778 46.9
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 5.0e-98 363.2 774 57.4
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 9.4e-97 359.0 771 55.6
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 2.3e-95 354.4 773 49.9
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 2.3e-95 354.4 741 49.3
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 5.1e-95 353.2 771 48.0
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 3.3e-94 350.5 776 54.5
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 9.7e-94 349.0 780 57.3
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 2.6e-91 340.9 773 57.2
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 2.2e-90 337.8 772 57.5
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 8.5e-90 335.9 732 54.9
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 2.1e-88 331.3 775 53.8
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 1.7e-85 321.6 684 58.6
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 2.2e-85 321.2 788 47.5
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 8.2e-85 319.3 767 57.0
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 1.4e-84 318.5 771 45.8
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.4e-84 318.5 775 48.5
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 6.5e-82 309.7 759 53.1
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 1.1e-81 308.9 751 54.1
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 5.5e-81 306.6 757 52.7
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 2.7e-80 304.3 739 50.2
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 1.8e-79 301.6 737 47.1
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 2.0e-78 298.1 776 51.7
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 3.3e-78 297.4 730 60.5
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 5.7e-78 296.6 773 48.1
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 9.7e-78 295.8 759 52.2
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.2e-75 288.9 772 56.1
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.0e-75 288.1 767 54.0
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 8.5e-74 282.7 685 54.0
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.1e-73 282.3 774 46.1
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 6.1e-72 276.6 781 45.3
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 4.0e-71 273.9 783 55.8
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 6.8e-71 273.1 759 52.0
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 1.2e-70 272.3 788 44.3
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 4.4e-70 270.4 772 45.5
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 2.4e-68 264.6 779 48.8
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 4.1e-68 263.8 770 44.5
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 2.7e-67 261.2 772 53.6
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 4.5e-67 260.4 480 63.1
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 1.0e-66 259.2 779 50.4
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.3e-66 258.8 781 53.0
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 6.5e-66 256.5 769 53.2
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 6.5e-66 256.5 753 49.3
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.1e-65 255.8 754 48.8
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 4.2e-65 253.8 772 46.5
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 4.7e-64 250.4 726 43.1
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 6.8e-63 246.5 781 43.9
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 8.8e-63 246.1 777 45.3
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 3.4e-62 244.2 779 51.7
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 2.8e-61 241.1 782 45.4
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 8.3e-61 239.6 772 42.2
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 1.8e-60 238.4 740 46.6
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 8.6e-58 229.6 778 49.0
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-57 229.2 342 52.6
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 1.1e-57 229.2 780 45.6
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 2.5e-57 228.0 752 44.9
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.3e-55 221.5 270 51.5
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 7.5e-54 216.5 782 41.0
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 8.3e-53 213.0 773 45.1
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 2.3e-50 204.9 778 45.0
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 1.1e-49 202.6 771 40.1
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 4.3e-49 200.7 774 39.8
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 2.3e-47 194.9 767 43.3
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 5.2e-47 193.7 773 40.6
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 4.9e-45 187.2 537 47.7
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.2e-43 182.6 747 41.6
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 3.5e-43 181.0 741 45.7
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 1.2e-40 172.6 777 40.5
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 1.2e-40 172.6 791 43.2
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 1.6e-40 172.2 356 49.7
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 6.2e-40 170.2 780 40.0
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 6.2e-40 170.2 780 40.0
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 8.0e-40 169.9 736 39.7
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 2.6e-38 164.9 763 40.0
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 7.5e-38 163.3 777 41.1
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 7.5e-38 163.3 341 54.0
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 2.9e-37 161.4 778 41.3
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 6.4e-37 160.2 780 41.0
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 4.6e-35 154.1 311 52.4
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 4.7e-32 144.1 199 47.2
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 3.2e-28 131.3 230 47.0
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.5e-25 122.5 146 55.5
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.5e-25 121.7 215 65.6
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 7.6e-22 110.2 801 37.7
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.9e-20 105.5 715 41.0
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 7.1e-20 103.6 773 38.0
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 2.7e-19 101.7 125 51.2
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 2.5e-17 95.1 381 37.0
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 9.6e-17 93.2 175 38.3
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.3e-16 92.8 150 46.0
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 1.8e-15 89.0 143 47.6
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 3.2e-12 78.2 157 40.8
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 6.0e-11 73.9 104 39.4
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 6.0e-11 73.9 98 42.9
Sabra18G0029000 Salix brachista HOM05D006421 ORTHO05D008268 8.7e-10 70.1 107 46.7
PSO170G1391 Papaver somniferum HOM05D006421 ORTHO05D008268 4.0e-07 61.2 149 30.2


User provided reference genes

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