Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 1.1e-115 419.9 203 100.0
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 5.7e-99 364.4 204 88.7
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.8e-97 359.4 204 87.7
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.8e-97 359.4 204 86.3
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 5.4e-97 357.8 204 86.8
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 1.6e-96 356.3 205 88.3
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.0e-96 355.9 204 87.3
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 2.0e-96 355.9 209 85.2
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 5.9e-96 354.4 204 86.8
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.3e-95 353.2 204 86.8
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 1.3e-95 353.2 203 85.7
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.7e-95 352.8 203 85.2
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 8.6e-95 350.5 204 86.3
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 7.2e-94 347.4 203 82.3
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 9.5e-94 347.1 206 83.0
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 3.6e-93 345.1 208 84.6
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 6.1e-93 344.4 203 84.2
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 1.4e-92 343.2 202 83.2
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 3.0e-92 342.0 206 83.5
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 5.7e-91 337.8 203 81.3
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 9.8e-91 337.0 203 81.8
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 1.7e-90 336.3 212 79.7
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 1.7e-90 336.3 205 82.0
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 2.2e-90 335.9 207 81.2
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 1.1e-89 333.6 205 78.5
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 1.8e-89 332.8 213 77.9
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 3.2e-89 332.0 203 80.8
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 4.1e-89 331.6 204 82.4
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 7.0e-89 330.9 184 85.3
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 7.8e-88 327.4 203 79.8
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 2.3e-87 325.9 205 79.5
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 1.1e-86 323.6 204 76.5
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 1.5e-86 323.2 203 76.8
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 1.9e-86 322.8 197 77.7
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 1.9e-86 322.8 203 77.3
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 4.3e-86 321.6 203 78.3
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 4.3e-86 321.6 168 88.1
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 5.6e-86 321.2 204 77.9
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.6e-86 321.2 203 78.8
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 1.2e-85 320.1 166 87.3
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 1.2e-85 320.1 168 86.9
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 1.6e-85 319.7 197 77.2
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.6e-85 319.7 197 77.2
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 1.6e-85 319.7 197 77.2
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 1.6e-85 319.7 197 77.2
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 2.1e-85 319.3 197 77.2
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 2.1e-85 319.3 205 76.6
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 2.1e-85 319.3 205 78.5
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 2.8e-85 318.9 197 77.2
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 2.8e-85 318.9 203 77.8
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 3.6e-85 318.5 214 74.8
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 3.6e-85 318.5 170 86.5
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 3.6e-85 318.5 203 77.8
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 3.6e-85 318.5 197 77.7
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 3.6e-85 318.5 202 77.7
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 8.0e-85 317.4 200 76.5
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 8.0e-85 317.4 206 76.2
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.8e-84 316.2 205 77.1
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 3.1e-84 315.5 204 77.0
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 4.0e-84 315.1 170 86.5
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 8.9e-84 313.9 226 72.6
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 1.5e-83 313.2 204 76.5
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 2.0e-83 312.8 203 75.9
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 7.5e-83 310.8 203 76.4
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 7.5e-83 310.8 183 82.0
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 1.3e-82 310.1 197 77.2
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 2.2e-82 309.3 171 84.8
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 2.9e-82 308.9 230 70.0
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 8.3e-82 307.4 179 82.1
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 1.1e-81 307.0 203 73.9
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 3.2e-81 305.4 206 75.7
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 7.0e-81 304.3 205 74.1
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 9.2e-81 303.9 201 74.1
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 1.2e-80 303.5 177 81.9
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 7.8e-80 300.8 215 70.7
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 8.6e-79 297.4 209 72.2
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.9e-78 296.2 201 72.1
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 3.6e-77 292.0 153 86.9
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 2.3e-76 289.3 204 71.1
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 5.2e-76 288.1 182 81.9
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 8.9e-76 287.3 216 71.3
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 4.4e-75 285.0 169 79.9
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 1.1e-73 280.4 175 82.9
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 7.1e-73 277.7 164 81.1
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 7.8e-72 274.2 189 74.1
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 8.6e-71 270.8 141 88.7
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.1e-70 270.4 178 77.5
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 4.3e-70 268.5 167 75.4
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 3.6e-69 265.4 137 87.6
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 3.1e-68 262.3 167 76.6
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 4.4e-67 258.5 180 73.3
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 2.7e-64 249.2 137 84.7
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 3.5e-64 248.8 163 70.6
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 6.8e-60 234.6 163 67.5
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.1e-57 227.3 111 95.5
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 1.1e-57 227.3 166 63.9
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 1.4e-57 226.9 152 71.7
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 9.3e-57 224.2 161 68.9
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 1.7e-50 203.4 194 59.3
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 9.3e-49 197.6 156 60.9
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 1.5e-27 127.1 140 43.6
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.7e-18 97.1 165 38.2
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 2.2e-10 70.1 133 36.1
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 1.1e-09 67.8 37 78.4
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 6.7e-07 58.5 133 38.3
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 2.0e-06 57.0 132 32.6
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 3.3e-06 56.2 155 24.5


User provided reference genes

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