Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 7.8e-135 483.8 243 100.0
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 7.1e-112 407.5 242 83.9
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 4.9e-105 384.8 242 78.5
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 1.1e-88 330.5 244 70.5
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 1.3e-86 323.6 244 69.7
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 5.6e-77 291.6 203 74.4
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 3.8e-49 199.1 268 47.0
Prupe.1G470300 Prunus persica HOM05D010238 ORTHO05D010031 5.0e-41 172.2 142 64.1
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 3.5e-26 122.9 228 36.0
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 2.0e-21 107.1 237 32.9
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.8e-20 103.2 200 35.5
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 4.9e-20 102.4 201 34.8
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.2e-18 97.8 232 34.5
MD15G1112200 Malus domestica HOM05D010238 ORTHO05D010031 2.0e-18 97.1 115 44.3
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 4.3e-16 89.4 116 46.6
QL02p008501 Quercus lobata HOM05D020907 ORTHO05D010031 4.3e-16 89.4 91 53.8
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 9.5e-16 88.2 232 28.0
TPR.G23939 Trifolium pratense HOM05D010238 ORTHO05D010031 2.3e-14 83.6 95 44.2
QL10p010801 Quercus lobata HOM05D020907 ORTHO05D010031 1.2e-13 81.3 88 46.6
Rhsim02G0192000 Rhododendron simsii HOM05D010927 ORTHO05D010031 5.8e-13 79.0 228 28.1
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 7.5e-13 78.6 122 38.5
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 8.3e-12 75.1 88 48.9
TPR.G15657 Trifolium pratense HOM05D000890 ORTHO05D000697 8.3e-12 75.1 99 41.4
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 7.0e-11 72.0 233 29.6
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 4.6e-10 69.3 209 27.8
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 6.0e-10 68.9 216 28.2
RhsimUnG0039100 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.3e-09 67.8 98 41.8
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.7e-09 67.4 85 43.5
Rhsim02G0191800 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.1e-08 64.7 217 27.2
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 1.5e-08 64.3 204 28.4
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 1.5e-08 64.3 209 24.4
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 1.5e-08 64.3 209 24.4
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 4.3e-08 62.8 198 28.3
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 7.3e-08 62.0 83 42.2
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 7.3e-08 62.0 207 27.5
QL10p009756 Quercus lobata HOM05D020907 ORTHO05D010031 2.1e-07 60.5 113 34.5
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 2.8e-07 60.1 93 39.8
Cc06_g13000 Coffea canephora HOM05D010238 ORTHO05D010031 3.6e-07 59.7 87 40.2
QL10p009726 Quercus lobata HOM05D020907 ORTHO05D010031 3.6e-07 59.7 113 34.5
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 4.7e-07 59.3 213 25.8
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 6.2e-07 58.9 215 26.0
QL10p009746 Quercus lobata HOM05D020907 ORTHO05D010031 6.2e-07 58.9 113 33.6
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.8e-06 57.4 69 44.9
Rhsim02G0190000 Rhododendron simsii HOM05D010927 ORTHO05D010031 4.0e-06 56.2 187 27.8
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 6.8e-06 55.5 189 25.4
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 8.9e-06 55.1 133 29.3


User provided reference genes

Program Settings