Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 1.0e-134 483.4 244 100.0
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 5.6e-117 424.5 244 86.1
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 1.2e-111 406.8 242 83.9
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 3.4e-90 335.5 246 72.4
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 5.1e-86 321.6 246 69.9
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 3.1e-75 285.8 203 74.4
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 6.5e-49 198.4 264 45.8
Prupe.1G470300 Prunus persica HOM05D010238 ORTHO05D010031 1.5e-37 160.6 144 61.1
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 3.2e-27 126.3 228 36.8
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 3.6e-23 112.8 235 32.3
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 8.0e-23 111.7 201 36.3
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 2.0e-21 107.1 223 34.5
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.2e-20 103.6 201 34.3
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 3.9e-17 92.8 112 48.2
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 5.1e-17 92.4 232 27.6
MD15G1112200 Malus domestica HOM05D010238 ORTHO05D010031 5.1e-17 92.4 115 41.7
QL02p008501 Quercus lobata HOM05D020907 ORTHO05D010031 1.4e-14 84.3 91 51.6
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 3.1e-14 83.2 123 39.0
TPR.G23939 Trifolium pratense HOM05D010238 ORTHO05D010031 4.0e-14 82.8 95 43.2
Rhsim02G0192000 Rhododendron simsii HOM05D010927 ORTHO05D010031 6.8e-14 82.0 230 27.4
QL10p010801 Quercus lobata HOM05D020907 ORTHO05D010031 3.7e-12 76.3 88 43.2
TPR.G15657 Trifolium pratense HOM05D000890 ORTHO05D000697 3.7e-12 76.3 100 42.0
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 8.3e-12 75.1 76 50.0
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 4.1e-11 72.8 232 28.0
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 9.2e-11 71.6 73 46.6
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 1.2e-10 71.2 217 28.1
QL10p009726 Quercus lobata HOM05D020907 ORTHO05D010031 1.7e-09 67.4 113 35.4
QL10p009756 Quercus lobata HOM05D020907 ORTHO05D010031 1.7e-09 67.4 113 35.4
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 3.0e-09 66.6 198 29.8
QL10p009746 Quercus lobata HOM05D020907 ORTHO05D010031 3.0e-09 66.6 113 34.5
Rhsim02G0191800 Rhododendron simsii HOM05D010927 ORTHO05D010031 5.1e-09 65.9 217 24.9
RhsimUnG0039100 Rhododendron simsii HOM05D010927 ORTHO05D010031 5.1e-09 65.9 76 46.1
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 6.6e-09 65.5 210 26.2
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 6.6e-09 65.5 210 26.2
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 3.3e-08 63.2 205 28.8
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 4.3e-08 62.8 216 25.9
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 7.3e-08 62.0 215 25.6
QL10p009707 Quercus lobata HOM05D020907 ORTHO05D010031 7.3e-08 62.0 113 32.7
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 1.6e-07 60.8 114 35.1
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 2.1e-07 60.5 95 37.9
Rhsim02G0190000 Rhododendron simsii HOM05D010927 ORTHO05D010031 6.2e-07 58.9 187 28.9
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 8.1e-07 58.5 98 36.7
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 8.1e-07 58.5 208 25.0
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.1e-06 58.2 144 29.9
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.1e-06 58.2 69 43.5
Rhsim02G0192200 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.4e-06 57.8 118 33.1
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 1.8e-06 57.4 211 26.1
RhsimUnG0218700 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.8e-06 57.4 91 35.2
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 5.2e-06 55.8 189 28.0
Cc06_g13000 Coffea canephora HOM05D010238 ORTHO05D010031 6.8e-06 55.5 87 36.8


User provided reference genes

Program Settings