Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 1.8e-128 462.6 233 100.0
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 1.6e-100 369.8 236 80.9
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 1.7e-86 323.2 244 69.7
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 6.4e-86 321.2 246 69.9
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 3.0e-83 312.4 247 68.0
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 3.4e-55 219.2 200 62.5
Prupe.1G470300 Prunus persica HOM05D010238 ORTHO05D010031 2.7e-52 209.5 136 75.7
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 3.3e-42 176.0 267 42.3
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 6.1e-28 128.6 217 38.7
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 7.4e-26 121.7 239 34.3
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.9e-21 107.1 242 33.9
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 3.9e-19 99.4 187 34.8
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 1.3e-17 94.4 191 33.5
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 3.7e-17 92.8 216 31.5
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 3.1e-16 89.7 239 27.2
MD15G1112200 Malus domestica HOM05D010238 ORTHO05D010031 2.0e-15 87.0 115 40.9
Rhsim02G0192000 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.0e-14 84.7 217 27.2
TPR.G23939 Trifolium pratense HOM05D010238 ORTHO05D010031 1.3e-14 84.3 126 38.9
QL02p008501 Quercus lobata HOM05D020907 ORTHO05D010031 1.5e-13 80.9 83 51.8
QL10p010801 Quercus lobata HOM05D020907 ORTHO05D010031 1.6e-12 77.4 187 33.7
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 2.1e-12 77.0 221 29.9
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 8.0e-12 75.1 83 50.6
TPR.G15657 Trifolium pratense HOM05D000890 ORTHO05D000697 8.0e-12 75.1 128 37.5
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 1.8e-11 73.9 119 37.8
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 4.0e-11 72.8 204 31.4
Rhsim02G0191800 Rhododendron simsii HOM05D010927 ORTHO05D010031 8.8e-11 71.6 198 27.3
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 2.0e-10 70.5 76 43.4
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 4.4e-10 69.3 207 24.6
QL10p009707 Quercus lobata HOM05D020907 ORTHO05D010031 1.3e-09 67.8 180 30.0
QL10p009726 Quercus lobata HOM05D020907 ORTHO05D010031 1.3e-09 67.8 180 30.0
QL10p009746 Quercus lobata HOM05D020907 ORTHO05D010031 1.3e-09 67.8 197 28.4
QL10p009756 Quercus lobata HOM05D020907 ORTHO05D010031 1.3e-09 67.8 180 30.0
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 1.7e-09 67.4 187 29.4
RhsimUnG0039100 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.7e-09 66.2 199 26.1
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 8.2e-09 65.1 191 27.7
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 1.4e-08 64.3 184 28.8
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 2.4e-08 63.5 198 29.3
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 1.2e-07 61.2 162 32.1
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 1.6e-07 60.8 216 28.7
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 2.0e-07 60.5 95 38.9
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 7.7e-07 58.5 179 26.8
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 7.7e-07 58.5 179 26.8
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.0e-06 58.2 183 26.2
Cc06_g13000 Coffea canephora HOM05D010238 ORTHO05D010031 1.3e-06 57.8 87 41.4
RhsimUnG0204100 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.8e-06 56.2 85 38.8
SGA_v2.0_scaffold173G39118 Striga asiatica HOM05D010605 ORTHO05D010031 3.8e-06 56.2 182 28.0
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 5.0e-06 55.8 198 23.7
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 5.0e-06 55.8 198 23.7
RhsimUnG0144500 Rhododendron simsii HOM05D010927 ORTHO05D010031 8.5e-06 55.1 85 38.8


User provided reference genes

Program Settings