Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 1.2e-86 323.2 165 100.0
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.6e-43 179.9 139 67.6
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 2.1e-43 179.5 134 69.4
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.6e-43 178.7 139 67.6
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 8.1e-43 177.6 139 66.9
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 1.8e-42 176.4 132 68.9
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 4.4e-41 171.8 116 69.8
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 7.6e-41 171.0 133 66.2
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 2.9e-40 169.1 132 64.4
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 2.4e-39 166.0 133 62.4
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 4.1e-39 165.2 121 69.4
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 5.4e-39 164.9 138 61.6
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 7.1e-39 164.5 133 63.2
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 9.2e-39 164.1 118 67.8
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 9.2e-39 164.1 138 61.6
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 1.2e-38 163.7 125 64.8
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 1.6e-38 163.3 133 62.4
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 2.1e-38 162.9 114 71.9
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 2.7e-38 162.5 133 62.4
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 3.5e-38 162.2 138 63.0
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 6.0e-38 161.4 113 69.0
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 7.8e-38 161.0 129 65.1
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 1.0e-37 160.6 138 60.9
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 1.3e-37 160.2 143 57.3
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 1.7e-37 159.8 139 61.2
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 1.7e-37 159.8 135 60.7
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 2.3e-37 159.5 139 61.9
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 2.3e-37 159.5 139 57.6
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 3.0e-37 159.1 140 61.4
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 3.9e-37 158.7 131 61.8
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 6.6e-37 157.9 152 55.3
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 8.6e-37 157.5 117 69.2
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 1.5e-36 156.8 136 61.8
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 1.9e-36 156.4 143 59.4
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 1.9e-36 156.4 140 57.1
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 7.3e-36 154.5 123 64.2
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 9.6e-36 154.1 121 61.2
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 1.2e-35 153.7 139 58.3
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 2.1e-35 152.9 127 61.4
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 2.1e-35 152.9 136 58.8
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 3.6e-35 152.1 139 60.4
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 3.6e-35 152.1 115 68.7
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 4.7e-35 151.8 138 58.7
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 6.2e-35 151.4 127 60.6
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 8.1e-35 151.0 130 58.5
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 8.1e-35 151.0 132 56.8
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 1.8e-34 149.8 116 63.8
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 4.0e-34 148.7 121 62.8
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 5.2e-34 148.3 112 64.3
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 5.2e-34 148.3 138 58.7
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 8.9e-34 147.5 122 61.5
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 1.5e-33 146.7 136 56.6
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 2.6e-33 146.0 130 56.9
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 2.6e-33 146.0 128 57.8
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 2.6e-33 146.0 136 54.4
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 2.6e-33 146.0 118 63.6
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 3.4e-33 145.6 130 56.2
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 3.4e-33 145.6 128 57.8
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 3.4e-33 145.6 128 57.8
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 4.4e-33 145.2 139 57.6
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 4.4e-33 145.2 130 55.4
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 5.8e-33 144.8 145 57.2
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 9.9e-33 144.1 130 56.9
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 1.7e-32 143.3 123 57.7
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 2.2e-32 142.9 137 54.0
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 2.2e-32 142.9 140 58.6
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 3.8e-32 142.1 130 56.2
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 3.8e-32 142.1 130 56.2
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 8.4e-32 141.0 130 54.6
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 8.4e-32 141.0 133 56.4
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 1.4e-31 140.2 119 58.8
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 1.4e-31 140.2 127 57.5
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 2.4e-31 139.4 130 54.6
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 4.2e-31 138.7 130 56.2
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 4.2e-31 138.7 147 54.4
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 4.2e-31 138.7 132 54.5
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 5.4e-31 138.3 132 56.1
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 7.1e-31 137.9 132 54.5
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 9.3e-31 137.5 112 58.9
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 9.3e-31 137.5 108 64.8
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 1.2e-30 137.1 115 58.3
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 2.1e-30 136.3 111 62.2
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 2.1e-30 136.3 108 63.0
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 3.5e-30 135.6 130 53.8
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 3.5e-30 135.6 130 53.8
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 4.6e-30 135.2 116 50.9
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 1.0e-29 134.0 132 54.5
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 2.3e-29 132.9 149 51.0
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 3.0e-29 132.5 144 50.7
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 6.6e-29 131.3 163 50.3
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 6.6e-29 131.3 163 50.3
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 1.9e-28 129.8 112 54.5
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 2.5e-28 129.4 155 50.3
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 2.1e-27 126.3 108 59.3
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 2.8e-27 125.9 110 56.4
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 4.0e-26 122.1 150 44.7
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 9.0e-26 120.9 148 45.3
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 1.2e-25 120.6 135 50.4
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 3.4e-25 119.0 95 58.9
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 1.3e-24 117.1 116 55.2
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 8.4e-24 114.4 118 47.5
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 1.4e-23 113.6 110 51.8
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 3.2e-23 112.5 116 55.2
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 4.2e-23 112.1 121 52.9
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 1.6e-22 110.2 103 52.4
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 7.9e-22 107.8 145 40.0
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 1.0e-21 107.5 124 48.4
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 1.8e-21 106.7 100 58.0
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 1.8e-21 106.7 79 64.6
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 3.9e-21 105.5 132 46.2
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 6.2e-19 98.2 62 79.0
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 1.4e-18 97.1 59 79.7
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 4.9e-16 88.6 124 43.5
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 4.2e-15 85.5 80 52.5
CDE08G0278 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 8.7e-13 77.8 72 50.0
PSO063G7181 Papaver somniferum HOM05D006099 ORTHO05D007317 8.7e-13 77.8 64 62.5
MCO10G112 Micromonas commoda HOM05D006099 ORTHO05D007317 6.5e-08 61.6 120 33.3
Cre07.g346100 Chlamydomonas reinhardtii HOM05D006099 ORTHO05D007317 7.9e-06 54.7 57 50.9


User provided reference genes

Program Settings