Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 2.3e-102 375.6 187 100.0
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 5.7e-93 344.4 187 90.9
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.3e-86 323.2 187 85.0
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 1.3e-86 323.2 187 85.0
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 2.3e-86 322.4 187 84.5
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.9e-85 319.3 187 84.0
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 5.3e-75 284.6 187 72.2
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 6.9e-75 284.3 177 75.7
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 6.9e-75 284.3 189 74.1
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 2.0e-74 282.7 176 76.1
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 2.6e-74 282.3 191 72.3
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 7.7e-74 280.8 190 73.2
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 8.5e-73 277.3 179 74.3
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 2.5e-72 275.8 170 77.6
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 5.5e-72 274.6 174 74.1
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.7e-71 272.3 187 70.1
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.7e-71 272.3 187 70.1
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 6.1e-71 271.2 166 77.7
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 1.8e-70 269.6 166 75.9
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 3.9e-70 268.5 175 71.4
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 5.1e-70 268.1 173 76.9
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 6.7e-70 267.7 175 70.9
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.3e-69 265.4 176 70.5
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 5.7e-69 264.6 165 75.8
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 7.4e-69 264.2 189 69.3
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 1.3e-68 263.5 175 72.0
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.3e-68 263.5 165 74.5
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.7e-68 263.1 174 70.7
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 1.7e-68 263.1 187 67.4
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 2.2e-68 262.7 180 71.1
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 2.2e-68 262.7 170 74.1
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 2.8e-68 262.3 170 72.4
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 4.8e-68 261.5 169 72.2
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 4.8e-68 261.5 169 72.8
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 4.8e-68 261.5 169 72.8
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 6.3e-68 261.2 169 72.8
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 8.2e-68 260.8 211 64.5
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 1.1e-67 260.4 169 73.4
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 1.1e-67 260.4 169 72.8
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.1e-67 260.4 187 68.4
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 1.1e-67 260.4 184 67.4
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 1.8e-67 259.6 187 67.9
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 2.4e-67 259.2 169 72.2
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 5.3e-67 258.1 187 67.9
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 9.1e-67 257.3 172 72.1
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 9.1e-67 257.3 169 71.6
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 1.5e-66 256.5 199 64.8
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 2.0e-66 256.1 175 69.7
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 5.9e-66 254.6 170 70.0
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 5.9e-66 254.6 174 70.7
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 7.7e-66 254.2 173 72.3
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.0e-65 253.8 158 75.3
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 1.0e-65 253.8 168 69.0
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 5.0e-65 251.5 191 67.0
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 5.0e-65 251.5 165 72.1
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 6.5e-65 251.1 169 71.6
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.5e-64 250.0 169 70.4
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 2.5e-64 249.2 165 70.3
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 2.1e-63 246.1 169 67.5
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 2.1e-63 246.1 173 69.4
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 4.0e-62 241.9 158 70.9
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 6.7e-62 241.1 167 66.5
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 6.7e-62 241.1 157 73.9
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 8.8e-62 240.7 176 65.9
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 9.7e-61 237.3 158 70.3
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 9.7e-61 237.3 162 69.8
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 1.7e-60 236.5 158 71.5
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.7e-60 236.5 174 64.9
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 3.7e-60 235.3 158 70.9
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 3.7e-60 235.3 154 72.7
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 4.5e-58 228.4 138 78.3
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 7.7e-58 227.6 176 60.8
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 2.9e-57 225.7 152 69.1
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 3.8e-57 225.3 169 62.7
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 5.0e-57 224.9 173 61.3
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 8.5e-57 224.2 165 67.3
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 1.1e-56 223.8 176 60.2
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.2e-55 220.3 148 69.6
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 2.1e-55 219.5 256 46.1
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 1.2e-50 203.8 153 66.0
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 7.7e-50 201.1 168 61.3
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 6.5e-49 198.0 161 57.1
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 3.2e-48 195.7 205 51.7
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 2.7e-47 192.6 161 55.3
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.0e-46 190.7 121 76.0
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 3.0e-46 189.1 173 53.2
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 6.8e-46 188.0 157 56.1
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 2.0e-45 186.4 138 66.7
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 2.0e-45 186.4 123 69.9
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 6.3e-44 181.4 121 69.4
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 4.1e-43 178.7 153 60.8
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 1.7e-41 173.3 158 49.4
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.7e-41 173.3 132 65.2
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 1.9e-40 169.9 132 59.8
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 4.7e-39 165.2 165 49.7
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 8.9e-38 161.0 118 68.6
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 2.0e-37 159.8 145 52.4
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 2.6e-37 159.5 127 59.8
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 3.4e-37 159.1 97 76.3
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 7.5e-37 157.9 109 65.1
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 1.3e-36 157.1 126 58.7
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 6.4e-36 154.8 121 62.8
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 6.4e-36 154.8 106 70.8
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 8.3e-36 154.5 162 48.8
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.1e-35 154.1 107 69.2
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 3.5e-34 149.1 98 72.4
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 7.8e-34 147.9 88 77.3
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 4.7e-31 138.7 97 68.0
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.7e-28 130.2 130 56.2
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 4.1e-27 125.6 75 80.0
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 1.9e-24 116.7 121 51.2
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 4.4e-21 105.5 78 66.7
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 5.8e-21 105.1 155 38.7
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.3e-17 94.0 154 31.8
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 3.3e-16 89.4 76 51.3
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.8e-14 83.6 49 77.6
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 5.4e-11 72.0 49 65.3


User provided reference genes

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