Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 6.6e-55 217.2 118 100.0
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 9.9e-35 150.2 118 62.7
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 1.9e-33 146.0 118 59.3
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 7.1e-33 144.1 118 68.6
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.6e-32 142.9 118 58.5
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 6.6e-31 137.5 115 68.7
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 1.9e-30 136.0 117 59.0
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 2.1e-29 132.5 109 54.1
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 4.0e-28 128.3 114 53.5
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 1.5e-27 126.3 104 67.3
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 2.0e-27 125.9 121 55.4
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 2.0e-27 125.9 119 63.9
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 3.4e-27 125.2 127 48.8
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 3.4e-27 125.2 133 49.6
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 3.4e-27 125.2 131 52.7
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 3.4e-27 125.2 126 60.3
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 9.9e-27 123.6 114 56.1
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 1.3e-26 123.2 116 63.8
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 2.9e-26 122.1 131 50.4
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 3.8e-26 121.7 124 46.8
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 6.4e-26 120.9 128 53.9
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 1.1e-25 120.2 96 53.1
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 1.1e-25 120.2 135 46.7
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 1.9e-25 119.4 122 50.0
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 3.2e-25 118.6 93 71.0
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 1.6e-24 116.3 138 43.5
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 2.1e-24 115.9 128 54.7
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 3.5e-24 115.2 128 54.7
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 4.6e-24 114.8 137 54.7
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 6.0e-24 114.4 121 57.0
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 1.0e-23 113.6 88 54.5
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 1.3e-23 113.2 116 47.4
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 1.3e-23 113.2 99 65.7
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 3.9e-23 111.7 102 50.0
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 3.9e-23 111.7 93 69.9
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 5.1e-23 111.3 121 56.2
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 5.1e-23 111.3 93 68.8
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 6.6e-23 110.9 104 51.9
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 8.7e-23 110.5 93 69.9
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 8.7e-23 110.5 117 49.6
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 1.1e-22 110.2 98 52.0
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 1.5e-22 109.8 93 68.8
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 1.9e-22 109.4 109 47.7
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.9e-22 109.4 84 61.9
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 2.5e-22 109.0 134 56.0
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 2.5e-22 109.0 92 63.0
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 5.6e-22 107.8 100 63.0
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 7.3e-22 107.5 69 65.2
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 1.3e-21 106.7 123 56.1
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 1.3e-21 106.7 104 55.8
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 2.1e-21 105.9 122 56.6
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 2.8e-21 105.5 95 46.3
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 4.8e-21 104.8 74 73.0
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 1.1e-20 103.6 105 46.7
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 1.1e-20 103.6 99 47.5
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 1.1e-20 103.6 144 40.3
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 1.4e-20 103.2 89 49.4
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 4.0e-20 101.7 92 46.7
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 5.3e-20 101.3 96 63.5
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 6.9e-20 100.9 69 68.1
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 2.6e-19 99.0 69 59.4
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 3.4e-19 98.6 94 60.6
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 1.1e-17 93.6 63 66.7
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 4.2e-17 91.7 79 51.9
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 4.2e-17 91.7 63 57.1
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 7.1e-17 90.9 119 40.3
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 1.2e-16 90.1 95 58.9
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 1.6e-16 89.7 109 44.0
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 1.6e-16 89.7 62 56.5
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 2.7e-16 89.0 65 53.8
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 4.6e-16 88.2 94 46.8
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 2.3e-15 85.9 63 58.7
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 6.7e-15 84.3 70 51.4
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 1.5e-14 83.2 84 48.8
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 1.9e-14 82.8 91 49.5
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 1.9e-14 82.8 84 48.8
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 4.3e-14 81.6 84 48.8
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 1.3e-13 80.1 84 48.8
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 2.4e-12 75.9 83 42.2
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 2.9e-10 68.9 35 77.1
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 4.9e-10 68.2 37 67.6
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 8.4e-10 67.4 68 41.2
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 1.9e-09 66.2 52 57.7
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 3.2e-09 65.5 64 43.8
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 3.2e-09 65.5 65 40.0
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 3.9e-07 58.5 34 67.6
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 1.1e-06 57.0 30 63.3
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 1.1e-06 57.0 26 88.5


User provided reference genes

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