Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G453000 Prunus persica HOM05D008234 ORTHO05D010422 1.6e-220 769.2 414 100.0
MD08G1118800 Malus domestica HOM05D008234 ORTHO05D010422 2.2e-142 509.6 409 72.6
RcHm_v2.0_Chr6g0305711 Rosa chinensis HOM05D008234 ORTHO05D010422 7.2e-141 504.6 416 70.7
Dinv14224 Davidia involucrata HOM05D008234 ORTHO05D010422 4.9e-129 465.3 426 59.6
Actinidia31219 Actinidia chinensis HOM05D008234 ORTHO05D010422 2.8e-116 422.9 388 58.2
FAN20G2600 Fragaria x ananassa HOM05D008234 ORTHO05D010422 4.4e-114 415.6 413 57.4
Lj1g0008618 Lotus japonicus HOM05D008234 ORTHO05D010422 6.8e-107 391.7 385 54.5
TWI34G1157 Tripterygium wilfordii HOM05D008234 ORTHO05D010422 2.4e-104 383.3 416 51.9
Ca_12814_v3 Cicer arietinum L. HOM05D008234 ORTHO05D010422 7.1e-104 381.7 391 54.5
QL12p026340 Quercus lobata HOM05D008234 ORTHO05D010422 1.2e-103 380.9 413 56.4
FvH4_2g36160 Fragaria vesca HOM05D008234 ORTHO05D010422 1.6e-103 380.6 408 57.6
Hma1.2p1_1255F.1_g270650 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 2.1e-103 380.2 333 58.3
FAN15G0125 Fragaria x ananassa HOM05D008234 ORTHO05D010422 4.6e-103 379.0 413 56.7
CiPaw.08G023300 Carya illinoinensis HOM05D008234 ORTHO05D010422 1.1e-101 374.4 416 55.5
MSTRG.25893 Avicennia marina HOM05D008234 ORTHO05D010422 4.3e-101 372.5 389 52.7
TPR.G12012 Trifolium pratense HOM05D008234 ORTHO05D010422 1.2e-98 364.4 383 53.0
TAR626G1903 Trochodendron aralioides HOM05D008234 ORTHO05D010422 5.4e-96 355.5 422 49.8
Lj7P707T11 Lonicera japonica HOM05D008234 ORTHO05D010422 1.2e-95 354.4 330 54.5
Migut.A00244 Erythranthe guttata HOM05D008234 ORTHO05D010422 2.1e-95 353.6 390 51.0
Ah.16g105160 Amaranthus hybridus HOM05D008234 ORTHO05D010422 1.3e-94 350.9 404 49.5
Lsat_1_v5_gn_6_11021 Lactuca sativa HOM05D008234 ORTHO05D010422 7.3e-93 345.1 378 48.9
Aqoxy7G03839 Aquilegia oxysepala HOM05D008234 ORTHO05D010422 3.6e-92 342.8 412 48.8
Sabra06G0190100 Salix brachista HOM05D008234 ORTHO05D010422 3.6e-92 342.8 410 51.0
SGA_v2.0_scaffold185G40113 Striga asiatica HOM05D008234 ORTHO05D010422 3.1e-91 339.7 388 48.5
CDE04G1659 Ceratophyllum demersum HOM05D008234 ORTHO05D010422 1.5e-90 337.4 392 47.4
Cc08_g08970 Coffea canephora HOM05D008234 ORTHO05D010422 2.2e-89 333.6 401 49.6
SalBow4G0332 Salvia bowleyana HOM05D008234 ORTHO05D010422 1.6e-87 327.4 388 48.7
Medtr1g008360 Medicago truncatula HOM05D008234 ORTHO05D010422 4.3e-85 319.3 420 49.8
Manes.03G062500 Manihot esculenta HOM05D008234 ORTHO05D010422 5.6e-85 318.9 419 47.5
Hund19548 Selenicereus undatus HOM05D008234 ORTHO05D010422 2.1e-84 317.0 379 47.2
GSVIVG01035674001 Vitis vinifera HOM05D008234 ORTHO05D010422 2.0e-82 310.5 420 46.2
HanXRQChr02g0048071 Helianthus annuus HOM05D008234 ORTHO05D010422 4.9e-81 305.8 377 44.8
Cfa013340 Carpinus fangiana HOM05D001758 ORTHO05D005969 4.2e-80 302.8 336 55.4
Glyma.14G141400 Glycine max HOM05D008234 ORTHO05D010422 2.7e-79 300.1 421 42.8
Psat6g034200 Pisum sativum HOM05D008234 ORTHO05D010422 1.8e-78 297.4 421 44.4
CSS0041765 Camellia sinensis var. sinensis HOM05D008234 ORTHO05D010422 3.3e-77 293.1 388 49.2
Ciclev10008407m.g Citrus clementina HOM05D008234 ORTHO05D010422 3.3e-77 293.1 419 46.8
Thecc.03G110200 Theobroma cacao HOM05D008234 ORTHO05D010422 1.6e-76 290.8 403 47.1
AUR62023021 Chenopodium quinoa HOM05D008234 ORTHO05D010422 4.8e-76 289.3 414 41.8
Potri.006G243000 Populus trichocarpa HOM05D008234 ORTHO05D010422 1.1e-75 288.1 385 47.8
Duzib068G0878 Durio zibethinus HOM05D008234 ORTHO05D010422 4.0e-75 286.2 413 45.8
Gohir.A03G071900 Gossypium hirsutum HOM05D008234 ORTHO05D010422 1.2e-71 274.6 322 49.7
Haze_21845 Corylus avellana HOM05D008234 ORTHO05D010422 8.7e-70 268.5 325 52.3
Phvul.001G078800 Phaseolus vulgaris HOM05D008234 ORTHO05D010422 1.5e-69 267.7 425 44.2
Os03g0159700 Oryza sativa ssp. japonica HOM05D008234 ORTHO05D010422 7.4e-69 265.4 413 39.0
COL.COLO4_28841 Corchorus olitorius HOM05D008234 ORTHO05D010422 3.7e-68 263.1 362 45.9
Psat6g034160 Pisum sativum HOM05D008234 ORTHO05D010422 3.7e-68 263.1 388 42.8
EL10Ac2g04079 Beta vulgaris HOM05D008234 ORTHO05D010422 3.1e-67 260.0 438 41.3
ECA233G2242 Erigeron canadensis HOM05D008234 ORTHO05D010422 3.4e-66 256.5 275 48.4
CsaV3_3G047390 Cucumis sativus L. HOM05D008234 ORTHO05D010422 1.9e-64 250.8 279 48.4
MELO3C003586.2 Cucumis melo HOM05D008234 ORTHO05D010422 3.2e-64 250.0 283 47.3
Zm00001eb004480 Zea mays HOM05D008234 ORTHO05D010422 2.1e-63 247.3 390 37.2
HPP92_009609 Vanilla planifolia HOM05D008234 ORTHO05D010422 9.7e-61 238.4 345 40.0
Oeu011264.1 Olea europaea HOM05D008234 ORTHO05D010422 2.8e-60 236.9 299 47.8
AUR62009335 Chenopodium quinoa HOM05D008234 ORTHO05D010422 1.2e-58 231.5 283 44.5
Gorai.003G103400 Gossypium raimondii HOM05D008234 ORTHO05D001322 1.0e-54 218.4 287 47.0
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 3.0e-54 216.9 333 40.5
ATR0697G092 Amborella trichopoda HOM05D008234 ORTHO05D010422 2.0e-53 214.2 405 36.8
Nn2g11729 Nelumbo nucifera HOM05D008234 ORTHO05D010422 2.4e-51 207.2 424 40.8
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 3.1e-51 206.8 385 38.2
Gohir.D03G098600 Gossypium hirsutum HOM05D008234 ORTHO05D010422 2.2e-44 184.1 205 50.7
SEGI_11609 Sequoiadendron giganteum HOM05D008234 ORTHO05D010422 1.6e-39 167.9 252 36.5
Gohir.D03G098650 Gossypium hirsutum HOM05D008234 ORTHO05D010422 2.4e-35 154.1 136 62.5
Hma1.2p1_1434F.1_g283110 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 1.4e-14 85.1 86 44.2
Sed0021692 Sechium edule HOM05D008234 ORTHO05D010422 1.8e-14 84.7 99 42.4
Dinv11864 Davidia involucrata HOM05D008234 ORTHO05D010422 2.6e-13 80.9 70 54.3
AagrBONN_evm.TU.Sc2ySwM_369.313 Anthoceros agrestis HOM05D005775 ORTHO05D000023 2.3e-09 67.8 161 28.6
SHI15422 Sapria himalayana HOM05D005775 ORTHO05D000023 1.9e-08 64.7 330 20.9
TAR383G0679 Trochodendron aralioides HOM05D007173 ORTHO05D009151 2.1e-07 61.2 168 23.8
ClCG00G003600 Citrullus lanatus HOM05D005775 ORTHO05D000023 2.8e-07 60.8 309 21.4
Rhsim08G0188000 Rhododendron simsii HOM05D007173 ORTHO05D009151 4.0e-06 57.0 171 24.0
vmacro19218 Vaccinium macrocarpon HOM05D007173 ORTHO05D009151 4.0e-06 57.0 172 22.7
CsaV3_6G045830 Cucumis sativus L. HOM05D006414 ORTHO05D007780 5.2e-06 56.6 100 33.0
ClCG01G019140 Citrullus lanatus HOM05D006414 ORTHO05D007780 8.9e-06 55.8 100 32.0


User provided reference genes

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