Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G438700 Prunus persica HOM05D008060 ORTHO05D003608 2.5e-63 245.4 131 100.0
RcHm_v2.0_Chr6g0307441 Rosa chinensis HOM05D008060 ORTHO05D003608 5.6e-47 191.0 135 78.5
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.4e-44 181.4 126 77.8
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.9e-42 176.0 131 76.3
MD08G1103600 Malus domestica HOM05D008060 ORTHO05D003608 1.4e-37 159.8 108 82.4
MD15G1084900 Malus domestica HOM05D008060 ORTHO05D003608 5.3e-37 157.9 108 82.4
COL.COLO4_26476 Corchorus olitorius HOM05D008060 ORTHO05D003608 1.3e-35 153.3 129 69.0
Thecc.08G011100 Theobroma cacao HOM05D008060 ORTHO05D003608 4.9e-35 151.4 129 69.8
Manes.18G032600 Manihot esculenta HOM05D008060 ORTHO05D003608 8.4e-35 150.6 133 66.9
Gorai.010G018000 Gossypium raimondii HOM05D008060 ORTHO05D003608 2.4e-34 149.1 128 69.5
CiPaw.15G061700 Carya illinoinensis HOM05D008060 ORTHO05D003608 1.2e-33 146.7 130 66.9
Atru.chr13.648 Acer truncatum HOM05D008060 ORTHO05D003608 2.1e-33 146.0 133 65.4
Ciclev10003142m.g Citrus clementina HOM05D008060 ORTHO05D003608 2.7e-33 145.6 133 65.4
TWI14G0405 Tripterygium wilfordii HOM05D008060 ORTHO05D003608 1.3e-32 143.3 136 65.4
Cpa.g.c24415.3 Carica papaya HOM05D008060 ORTHO05D003608 3.9e-32 141.7 129 62.8
QL02p005402 Quercus lobata HOM05D008060 ORTHO05D003608 6.6e-32 141.0 137 61.3
Potri.014G032100 Populus trichocarpa HOM05D008060 ORTHO05D003608 2.8e-30 135.6 133 61.7
TAR628G0327 Trochodendron aralioides HOM05D008060 ORTHO05D003608 1.4e-29 133.3 126 64.3
Cfa018526 Carpinus fangiana HOM05D008060 ORTHO05D003608 1.8e-29 132.9 128 64.1
Rhsim06G0048200 Rhododendron simsii HOM05D008060 ORTHO05D003608 2.4e-29 132.5 123 64.2
Actinidia23264 Actinidia chinensis HOM05D008060 ORTHO05D003608 4.0e-29 131.7 128 62.5
Hma1.2p1_0982F.1_g243860 Hydrangea macrophylla HOM05D008060 ORTHO05D003608 4.0e-29 131.7 131 62.6
vmacro21539 Vaccinium macrocarpon HOM05D008060 ORTHO05D003608 2.6e-28 129.0 123 63.4
Lj5g0024863 Lotus japonicus HOM05D008060 ORTHO05D003608 7.6e-28 127.5 127 59.8
Sed0005091 Sechium edule HOM05D008060 ORTHO05D003608 9.9e-28 127.1 123 62.6
Ca_13301_v3 Cicer arietinum L. HOM05D008060 ORTHO05D003608 3.8e-27 125.2 130 55.4
Glyma.14G081900 Glycine max HOM05D008060 ORTHO05D003608 3.8e-27 125.2 120 60.8
Oeu009551.5 Olea europaea HOM05D008060 ORTHO05D003608 4.9e-27 124.8 133 55.6
TPR.G13670 Trifolium pratense HOM05D008060 ORTHO05D003608 6.4e-27 124.4 130 57.7
Eucgr.C04396 Eucalyptus grandis HOM05D008060 ORTHO05D003608 8.4e-27 124.0 130 58.5
arahy.Tifrunner.gnm1.ann1.QG0KJB Arachis hypogaea HOM05D008060 ORTHO05D003608 1.1e-26 123.6 126 58.7
arahy.Tifrunner.gnm1.ann1.RCB3UV Arachis hypogaea HOM05D008060 ORTHO05D003608 1.1e-26 123.6 126 58.7
Medtr1g019790 Medicago truncatula HOM05D008060 ORTHO05D003608 1.4e-26 123.2 130 55.4
Nn1g05834 Nelumbo nucifera HOM05D008060 ORTHO05D003608 1.9e-26 122.9 133 57.9
Glyma.17G243400 Glycine max HOM05D008060 ORTHO05D003608 2.4e-26 122.5 130 58.5
Sc02g0007030 Simmondsia chinensis HOM05D008060 ORTHO05D003608 2.4e-26 122.5 132 55.3
Oeu043550.2 Olea europaea HOM05D008060 ORTHO05D003608 1.2e-25 120.2 130 55.4
ClCG05G019750 Citrullus lanatus HOM05D008060 ORTHO05D003608 1.6e-25 119.8 133 57.1
MELO3C016740.2 Cucumis melo HOM05D008060 ORTHO05D003608 1.6e-25 119.8 119 58.0
Sabra14G0022600 Salix brachista HOM05D008060 ORTHO05D003608 1.6e-25 119.8 121 57.0
CsaV3_4G034180 Cucumis sativus L. HOM05D008060 ORTHO05D003608 2.1e-25 119.4 122 59.0
PSO210G0392 Papaver somniferum HOM05D008060 ORTHO05D003608 3.5e-25 118.6 117 59.0
Psat6g012680 Pisum sativum HOM05D008060 ORTHO05D003608 3.5e-25 118.6 130 56.2
Aqoxy5G01268 Aquilegia oxysepala HOM05D008060 ORTHO05D003608 1.3e-24 116.7 119 58.0
PSO170G4922 Papaver somniferum HOM05D008060 ORTHO05D003608 1.3e-24 116.7 117 59.0
Migut.C00596 Erythranthe guttata HOM05D008060 ORTHO05D003608 2.3e-24 115.9 131 55.7
Phvul.001G020900 Phaseolus vulgaris HOM05D008060 ORTHO05D003608 3.9e-24 115.2 120 56.7
VMungo0647G2565 Vigna mungo HOM05D008060 ORTHO05D003608 3.9e-24 115.2 134 53.7
Lalb_Chr14g0368781 Lupinus albus HOM05D008060 ORTHO05D003608 1.5e-23 113.2 105 62.9
MSTRG.1335 Avicennia marina HOM05D008060 ORTHO05D003608 5.6e-23 111.3 132 52.3
SalBow8G2726 Salvia bowleyana HOM05D008060 ORTHO05D003608 9.6e-23 110.5 132 49.2
SalBow8G3337 Salvia bowleyana HOM05D008060 ORTHO05D003608 9.6e-23 110.5 132 49.2
RcHm_v2.0_Chr5g0002021 Rosa chinensis HOM05D008060 ORTHO05D003608 2.8e-22 109.0 83 72.3
ECA247G0743 Erigeron canadensis HOM05D008060 ORTHO05D003608 4.8e-22 108.2 132 50.0
Lsat_1_v5_gn_1_20181 Lactuca sativa HOM05D008060 ORTHO05D003608 8.1e-22 107.5 136 50.7
CANSAT54G1663 Cannabis sativa HOM05D008060 ORTHO05D003608 1.1e-21 107.1 135 51.9
Ah.05g168850 Amaranthus hybridus HOM05D008060 ORTHO05D003608 2.4e-21 105.9 131 49.6
SalBow7G2854 Salvia bowleyana HOM05D008060 ORTHO05D003608 6.9e-21 104.4 125 48.8
FAN27G2960 Fragaria x ananassa HOM05D002103 ORTHO05D007890 9.0e-21 104.0 84 75.0
AUR62022431 Chenopodium quinoa HOM05D008060 ORTHO05D003608 1.5e-20 103.2 134 50.7
QL02p005445 Quercus lobata HOM05D008060 ORTHO05D003608 5.5e-18 94.7 68 67.6
HanXRQChr04g0103541 Helianthus annuus HOM05D008060 ORTHO05D003608 7.1e-18 94.4 105 53.3
Gohir.A06G017100 Gossypium hirsutum HOM05D008060 ORTHO05D003608 1.6e-17 93.2 95 61.1
Gohir.D06G015200 Gossypium hirsutum HOM05D008060 ORTHO05D003608 2.7e-17 92.4 90 64.4
ATR0100G017 Amborella trichopoda HOM05D008060 ORTHO05D003608 7.9e-17 90.9 102 49.0
HPP92_016379 Vanilla planifolia HOM05D008060 ORTHO05D003608 2.3e-16 89.4 125 45.6
Zm00001eb193760 Zea mays HOM05D008060 ORTHO05D003608 1.3e-14 83.6 119 39.5
Os02g0761500 Oryza sativa ssp. japonica HOM05D008060 ORTHO05D003608 4.8e-14 81.6 135 37.0
SHI08293 Sapria himalayana HOM05D002103 ORTHO05D007890 5.3e-13 78.2 93 51.6
DCAR_019463 Daucus carota HOM05D002103 ORTHO05D004020 4.5e-12 75.1 63 60.3


User provided reference genes

Program Settings