Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G436400 Prunus persica HOM05D000955 ORTHO05D001429 6.3e-51 203.8 99 100.0
Prupe.1G436700 Prunus persica HOM05D000955 ORTHO05D001429 8.0e-22 107.1 103 52.4
RcHm_v2.0_Chr6g0307841 Rosa chinensis HOM05D000955 ORTHO05D001429 8.6e-16 87.0 75 58.7
Prupe.1G437100 Prunus persica HOM05D000955 ORTHO05D001429 1.9e-15 85.9 79 57.0
Prupe.1G436900 Prunus persica HOM05D000955 ORTHO05D001429 7.3e-15 84.0 79 55.7
Prupe.1G436500 Prunus persica HOM05D000955 ORTHO05D001429 1.2e-14 83.2 88 54.5
FAN20G2972 Fragaria x ananassa HOM05D017863 ORTHO05D020646 8.1e-14 80.5 79 54.4
Prupe.1G436800 Prunus persica HOM05D000955 ORTHO05D001429 1.8e-13 79.3 88 51.1
Prupe.1G437000 Prunus persica HOM05D000955 ORTHO05D001429 1.8e-13 79.3 88 51.1
FvH4_2g34530 Fragaria vesca HOM05D000955 ORTHO05D001429 1.2e-12 76.6 87 47.1
Prupe.1G437200 Prunus persica HOM05D000955 ORTHO05D001429 1.2e-12 76.6 80 50.0
Cfa018540 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.0e-12 75.9 89 44.9
RcHm_v2.0_Chr3g0490571 Rosa chinensis HOM05D000955 ORTHO05D001429 2.0e-12 75.9 77 49.4
Cfa018544 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.6e-12 75.5 84 45.2
FAN20G2975 Fragaria x ananassa HOM05D000955 ORTHO05D001429 1.3e-11 73.2 84 45.2
FAN27G1403 Fragaria x ananassa HOM05D000955 ORTHO05D001429 1.3e-11 73.2 84 46.4
Gohir.D06G016500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.7e-11 72.8 67 56.7
Gorai.010G019400 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.7e-11 72.8 67 56.7
COL.COLO4_08734 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.2e-11 72.4 79 50.6
Manes.18G036400 Manihot esculenta HOM05D000955 ORTHO05D001429 2.2e-11 72.4 95 42.1
Prupe.1G436600 Prunus persica HOM05D000955 ORTHO05D001429 2.2e-11 72.4 79 53.2
Thecc.08G008600 Theobroma cacao HOM05D000955 ORTHO05D001429 2.9e-11 72.0 81 53.1
RcHm_v2.0_Chr6g0307631 Rosa chinensis HOM05D000955 ORTHO05D001429 3.7e-11 71.6 77 46.8
Sed0000195 Sechium edule HOM05D000955 ORTHO05D001429 3.7e-11 71.6 86 46.5
Thecc.04G032600 Theobroma cacao HOM05D000955 ORTHO05D001429 8.3e-11 70.5 72 50.0
Thecc.08G009100 Theobroma cacao HOM05D000955 ORTHO05D001429 1.1e-10 70.1 67 56.7
Gohir.D01G107400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.9e-10 69.3 82 50.0
Gorai.002G131800 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.9e-10 69.3 82 50.0
ClCG05G019810 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.2e-10 68.6 84 42.9
Gohir.A01G119200 Gossypium hirsutum HOM05D000955 ORTHO05D001429 3.2e-10 68.6 82 48.8
Atru.chr13.675 Acer truncatum HOM05D000955 ORTHO05D001429 4.1e-10 68.2 72 51.4
Gohir.A06G018300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 5.4e-10 67.8 67 55.2
Cfa018538 Carpinus fangiana HOM05D000955 ORTHO05D001429 7.1e-10 67.4 82 43.9
CiPaw.15G058900 Carya illinoinensis HOM05D000955 ORTHO05D001429 7.1e-10 67.4 83 47.0
Sed0006046 Sechium edule HOM05D000955 ORTHO05D001429 7.1e-10 67.4 84 41.7
Thecc.08G009300 Theobroma cacao HOM05D000955 ORTHO05D001429 7.1e-10 67.4 58 60.3
Atru.chr13.678 Acer truncatum HOM05D000955 ORTHO05D001429 9.2e-10 67.0 69 56.5
CsaV3_4G034260 Cucumis sativus L. HOM05D000955 ORTHO05D001429 9.2e-10 67.0 84 41.7
Sed0018620 Sechium edule HOM05D000955 ORTHO05D001429 9.2e-10 67.0 84 41.7
Atru.chr13.677 Acer truncatum HOM05D000955 ORTHO05D001429 1.2e-09 66.6 74 51.4
CiPaw.15G060100 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.2e-09 66.6 74 48.6
QL02p005085 Quercus lobata HOM05D000955 ORTHO05D001429 1.2e-09 66.6 84 44.0
Sed0002759 Sechium edule HOM05D000955 ORTHO05D001429 1.2e-09 66.6 84 47.6
Ciclev10002898m.g Citrus clementina HOM05D000955 ORTHO05D001429 3.5e-09 65.1 91 42.9
COL.COLO4_17164 Corchorus olitorius HOM05D000955 ORTHO05D001429 3.5e-09 65.1 70 50.0
RcHm_v2.0_Chr6g0278331 Rosa chinensis HOM05D000955 ORTHO05D001429 3.5e-09 65.1 89 41.6
QL02p005194 Quercus lobata HOM05D000955 ORTHO05D001429 4.6e-09 64.7 77 42.9
MELO3C016746.2 Cucumis melo HOM05D000955 ORTHO05D001429 6.0e-09 64.3 84 41.7
RcHm_v2.0_Chr6g0307801 Rosa chinensis HOM05D017863 ORTHO05D020646 6.0e-09 64.3 85 47.1
Thecc.06G122100 Theobroma cacao HOM05D020587 ORTHO05D025708 6.0e-09 64.3 65 49.2
Atru.chr13.676 Acer truncatum HOM05D000955 ORTHO05D001429 7.8e-09 63.9 67 52.2
Actinidia22622 Actinidia chinensis HOM05D000955 ORTHO05D001429 7.8e-09 63.9 89 40.4
MELO3C010863.2 Cucumis melo HOM05D000955 ORTHO05D001429 7.8e-09 63.9 77 48.1
Manes.05G173400 Manihot esculenta HOM05D000955 ORTHO05D001429 7.8e-09 63.9 85 45.9
CiPaw.15G059600 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.0e-08 63.5 82 40.2
Nitab4.5_0001101g0050 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.0e-08 63.5 89 43.8
Atru.chr13.660 Acer truncatum HOM05D000955 ORTHO05D001429 1.3e-08 63.2 83 44.6
Lsat_1_v5_gn_4_125420 Lactuca sativa HOM05D000955 ORTHO05D001429 1.3e-08 63.2 78 41.0
RcHm_v2.0_Chr6g0278301 Rosa chinensis HOM05D000955 ORTHO05D001429 1.7e-08 62.8 89 41.6
Thecc.04G032100 Theobroma cacao HOM05D000955 ORTHO05D001429 1.7e-08 62.8 70 47.1
Atru.chr13.673 Acer truncatum HOM05D000955 ORTHO05D001429 2.3e-08 62.4 81 43.2
Atru.chr13.674 Acer truncatum HOM05D000955 ORTHO05D001429 2.3e-08 62.4 86 39.5
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.3e-08 62.4 79 44.3
COL.COLO4_26501 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.3e-08 62.4 83 45.8
Thecc.08G008700 Theobroma cacao HOM05D000955 ORTHO05D001429 2.3e-08 62.4 81 45.7
CAN.G1938.3 Capsicum annuum HOM05D000955 ORTHO05D001429 3.0e-08 62.0 87 37.9
Duzib093G0375 Durio zibethinus HOM05D000955 ORTHO05D001429 3.0e-08 62.0 82 48.8
COL.COLO4_08736 Corchorus olitorius HOM05D000955 ORTHO05D001429 3.9e-08 61.6 63 52.4
Potri.008G079132 Populus trichocarpa HOM05D000955 ORTHO05D001429 3.9e-08 61.6 61 52.5
Thecc.08G009800 Theobroma cacao HOM05D000955 ORTHO05D001429 3.9e-08 61.6 83 42.2
CiPaw.15G060000 Carya illinoinensis HOM05D000955 ORTHO05D001429 5.1e-08 61.2 74 44.6
COL.COLO4_26493 Corchorus olitorius HOM05D000955 ORTHO05D001429 5.1e-08 61.2 62 51.6
Gohir.A06G018101 Gossypium hirsutum HOM05D000955 ORTHO05D001429 5.1e-08 61.2 79 46.8
Sc26g0000770 Simmondsia chinensis HOM05D000955 ORTHO05D001429 5.1e-08 61.2 92 43.5
CiPaw.15G059300 Carya illinoinensis HOM05D000955 ORTHO05D001429 6.6e-08 60.8 59 49.2
Ciclev10003536m.g Citrus clementina HOM05D000955 ORTHO05D001429 6.6e-08 60.8 58 56.9
Thecc.08G008900 Theobroma cacao HOM05D000955 ORTHO05D001429 6.6e-08 60.8 85 42.4
Atru.chr13.685 Acer truncatum HOM05D000955 ORTHO05D001429 8.6e-08 60.5 83 43.4
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 8.6e-08 60.5 60 53.3
Gohir.D06G016400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 8.6e-08 60.5 79 46.8
Nitab4.5_0000686g0110 Nicotiana tabacum HOM05D000955 ORTHO05D003340 1.1e-07 60.1 82 43.9
Peaxi162Scf00303g00141 Petunia axillaris HOM05D000955 ORTHO05D001429 1.1e-07 60.1 83 42.2
Potri.008G079066 Populus trichocarpa HOM05D000955 ORTHO05D001429 1.1e-07 60.1 61 50.8
Atru.chr13.684 Acer truncatum HOM05D000955 ORTHO05D001429 1.5e-07 59.7 59 50.8
CAN.G705.3 Capsicum annuum HOM05D000955 ORTHO05D001429 1.5e-07 59.7 87 36.8
Manes.04G102700 Manihot esculenta HOM05D000955 ORTHO05D001429 1.9e-07 59.3 85 37.6
PGSC0003DMG400015414 Solanum tuberosum HOM05D000955 ORTHO05D001429 1.9e-07 59.3 84 41.7
CsaV3_2G027840 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.5e-07 58.9 73 45.2
Gohir.D02G091500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.5e-07 58.9 55 54.5
Gorai.005G102600 Gossypium raimondii HOM05D000955 ORTHO05D001429 2.5e-07 58.9 55 54.5
Sopen01g015530 Solanum pennellii HOM05D000955 ORTHO05D001429 2.5e-07 58.9 80 41.2
PGSC0003DMG400007984 Solanum tuberosum HOM05D000955 ORTHO05D001429 2.5e-07 58.9 80 45.0
Atru.chr13.682 Acer truncatum HOM05D000955 ORTHO05D001429 3.3e-07 58.5 93 39.8
CiPaw.15G059200 Carya illinoinensis HOM05D000955 ORTHO05D001429 3.3e-07 58.5 77 40.3
Solyc01g150126.1 Solanum lycopersicum HOM05D000955 ORTHO05D001429 3.3e-07 58.5 80 41.2
COL.COLO4_26491 Corchorus olitorius HOM05D000955 ORTHO05D001429 4.3e-07 58.2 58 48.3
Gohir.A05G261600 Gossypium hirsutum HOM05D000955 ORTHO05D001429 4.3e-07 58.2 95 42.1
Gohir.D02G091700 Gossypium hirsutum HOM05D000955 ORTHO05D001429 4.3e-07 58.2 81 45.7
Gorai.005G102800 Gossypium raimondii HOM05D000955 ORTHO05D001429 4.3e-07 58.2 81 45.7
HanXRQChr09g0267841 Helianthus annuus HOM05D000955 ORTHO05D001429 4.3e-07 58.2 66 43.9
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 4.3e-07 58.2 77 42.9
Thecc.08G009900 Theobroma cacao HOM05D000955 ORTHO05D001429 4.3e-07 58.2 58 55.2
Atru.chr13.663 Acer truncatum HOM05D000955 ORTHO05D001429 5.6e-07 57.8 95 42.1
COL.COLO4_26496 Corchorus olitorius HOM05D000955 ORTHO05D001429 5.6e-07 57.8 73 49.3
FvH4_2g34520 Fragaria vesca HOM05D017863 ORTHO05D020646 5.6e-07 57.8 84 42.9
Gorai.010G019300 Gossypium raimondii HOM05D000955 ORTHO05D001429 5.6e-07 57.8 79 45.6
Nitab4.5_0000686g0120 Nicotiana tabacum HOM05D000955 ORTHO05D001429 7.3e-07 57.4 78 41.0
Nitab4.5_0001024g0060 Nicotiana tabacum HOM05D000955 ORTHO05D001429 7.3e-07 57.4 80 41.2
Sc15g0003450 Simmondsia chinensis HOM05D000955 ORTHO05D001429 7.3e-07 57.4 60 51.7
Solyc04g079080.2 Solanum lycopersicum HOM05D000955 ORTHO05D003340 7.3e-07 57.4 79 44.3
Sopen04g032680 Solanum pennellii HOM05D000955 ORTHO05D001429 7.3e-07 57.4 79 44.3
CiPaw.16G045300 Carya illinoinensis HOM05D000955 ORTHO05D001429 9.5e-07 57.0 62 50.0
Potri.002G126900 Populus trichocarpa HOM05D000955 ORTHO05D001429 9.5e-07 57.0 77 46.8
Atru.chr13.681 Acer truncatum HOM05D000955 ORTHO05D001429 1.2e-06 56.6 76 43.4
Atru.chr13.683 Acer truncatum HOM05D000955 ORTHO05D001429 1.2e-06 56.6 59 50.8
CAN.G1518.8 Capsicum annuum HOM05D000955 ORTHO05D001429 1.2e-06 56.6 83 39.8
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.2e-06 56.6 100 40.0
Gohir.D05G263800 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.2e-06 56.6 56 50.0
Gorai.009G275600 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.2e-06 56.6 56 50.0
Manes.05G172901 Manihot esculenta HOM05D000955 ORTHO05D001429 1.2e-06 56.6 83 41.0
Nitab4.5_0002501g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.2e-06 56.6 80 41.2
Sc26g0000780 Simmondsia chinensis HOM05D000955 ORTHO05D001429 1.2e-06 56.6 89 40.4
Cfa018533 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.6e-06 56.2 84 41.7
CiPaw.15G059400 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.6e-06 56.2 81 37.0
Gohir.D05G263700 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.6e-06 56.2 70 45.7
Gorai.009G275500 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.6e-06 56.2 70 45.7
Manes.18G036100 Manihot esculenta HOM05D000955 ORTHO05D001429 1.6e-06 56.2 60 51.7
Nitab4.5_0000686g0100 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.6e-06 56.2 74 41.9
Thecc.04G031300 Theobroma cacao HOM05D000955 ORTHO05D001429 1.6e-06 56.2 83 43.4
EL10Ac1g00552 Beta vulgaris HOM05D000955 ORTHO05D001429 2.1e-06 55.8 76 43.4
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 2.1e-06 55.8 60 50.0
Haze_17535 Corylus avellana HOM05D000955 ORTHO05D001429 2.1e-06 55.8 72 45.8
Gohir.D05G263600 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.1e-06 55.8 85 38.8
Nitab4.5_0000686g0180 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.1e-06 55.8 78 39.7
Nitab4.5_0001101g0030 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.1e-06 55.8 74 40.5
Nitab4.5_0006068g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.1e-06 55.8 78 39.7
Thecc.08G009000 Theobroma cacao HOM05D000955 ORTHO05D001429 2.1e-06 55.8 65 50.8
Atru.chr13.664 Acer truncatum HOM05D000955 ORTHO05D002259 2.8e-06 55.5 80 47.5
Ah.05g171940 Amaranthus hybridus HOM05D000955 ORTHO05D001429 2.8e-06 55.5 76 44.7
CiPaw.15G060300 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.8e-06 55.5 70 42.9
AUR62019161 Chenopodium quinoa HOM05D000955 ORTHO05D001429 2.8e-06 55.5 69 46.4
AUR62034572 Chenopodium quinoa HOM05D000955 ORTHO05D001429 2.8e-06 55.5 69 46.4
ClCG08G015790 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.8e-06 55.5 86 40.7
Nitab4.5_0002468g0040 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.8e-06 55.5 78 38.5
PGSC0003DMG400023125 Solanum tuberosum HOM05D000955 ORTHO05D001429 2.8e-06 55.5 80 38.8
Cfa018536 Carpinus fangiana HOM05D000955 ORTHO05D001429 3.6e-06 55.1 80 42.5
COL.COLO4_26499 Corchorus olitorius HOM05D000955 ORTHO05D001429 3.6e-06 55.1 60 46.7
Gohir.A03G076800 Gossypium hirsutum HOM05D000955 ORTHO05D001429 3.6e-06 55.1 55 50.9
Gorai.005G102700 Gossypium raimondii HOM05D000955 ORTHO05D001429 3.6e-06 55.1 75 40.0
Hma1.2p1_0982F.1_g243960 Hydrangea macrophylla HOM05D000955 ORTHO05D001429 3.6e-06 55.1 80 42.5
QL02p005175 Quercus lobata HOM05D000955 ORTHO05D001429 3.6e-06 55.1 74 41.9
QL02p005180 Quercus lobata HOM05D000955 ORTHO05D001429 3.6e-06 55.1 79 39.2
Sopen07g012140 Solanum pennellii HOM05D000955 ORTHO05D001429 3.6e-06 55.1 80 38.8
Thecc.08G009700 Theobroma cacao HOM05D000955 ORTHO05D001429 3.6e-06 55.1 58 44.8
Atru.chr13.666 Acer truncatum HOM05D000955 ORTHO05D001429 4.7e-06 54.7 81 45.7
CiPaw.15G060200 Carya illinoinensis HOM05D000955 ORTHO05D001429 4.7e-06 54.7 58 46.6
AUR62014425 Chenopodium quinoa HOM05D000955 ORTHO05D001429 4.7e-06 54.7 69 46.4
COL.COLO4_26490 Corchorus olitorius HOM05D000955 ORTHO05D001429 4.7e-06 54.7 55 49.1
MELO3C010876.2 Cucumis melo HOM05D000955 ORTHO05D001429 4.7e-06 54.7 86 39.5
PGSC0003DMG400004460 Solanum tuberosum HOM05D000955 ORTHO05D001429 4.7e-06 54.7 81 38.3
CiPaw.16G045200 Carya illinoinensis HOM05D000955 ORTHO05D001429 6.2e-06 54.3 61 50.8
AUR62014426 Chenopodium quinoa HOM05D000955 ORTHO05D001429 6.2e-06 54.3 76 43.4
AUR62034571 Chenopodium quinoa HOM05D000955 ORTHO05D001429 6.2e-06 54.3 91 40.7
COL.COLO4_26489 Corchorus olitorius HOM05D000955 ORTHO05D001429 6.2e-06 54.3 58 46.6
CsaV3_2G027970 Cucumis sativus L. HOM05D000955 ORTHO05D001429 6.2e-06 54.3 76 42.1
Gohir.A05G261500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 6.2e-06 54.3 85 38.8
Nitab4.5_0008115g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 6.2e-06 54.3 78 38.5
Sc15g0003430 Simmondsia chinensis HOM05D000955 ORTHO05D001429 6.2e-06 54.3 81 39.5
Sopen04g032660 Solanum pennellii HOM05D000955 ORTHO05D001429 6.2e-06 54.3 78 38.5
Cfa018534 Carpinus fangiana HOM05D000955 ORTHO05D001429 8.1e-06 53.9 72 44.4
Cfa018535 Carpinus fangiana HOM05D000955 ORTHO05D001429 8.1e-06 53.9 72 47.2
Dinv35967 Davidia involucrata HOM05D000955 ORTHO05D001429 8.1e-06 53.9 60 50.0
FAN15G2471 Fragaria x ananassa HOM05D017863 ORTHO05D020646 8.1e-06 53.9 52 53.8
HanXRQChr09g0267701 Helianthus annuus HOM05D000955 ORTHO05D001429 8.1e-06 53.9 85 36.5
TWI36G1204 Tripterygium wilfordii HOM05D000955 ORTHO05D001429 8.1e-06 53.9 77 45.5


User provided reference genes

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