Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 1.2e-115 419.9 219 100.0
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 1.9e-108 396.0 208 98.6
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.2e-94 350.1 220 84.1
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 6.0e-94 347.8 220 83.6
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 1.7e-93 346.3 220 83.2
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 7.3e-92 340.9 217 81.6
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 4.0e-90 335.1 217 82.9
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 1.9e-87 326.2 217 76.5
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 4.2e-87 325.1 219 76.3
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 7.1e-87 324.3 217 78.3
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 1.2e-86 323.6 217 76.0
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 2.1e-86 322.8 217 77.4
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 6.0e-86 321.2 219 75.8
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 7.8e-86 320.9 219 74.9
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 1.3e-85 320.1 219 75.3
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 3.9e-85 318.5 218 75.2
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 1.5e-84 316.6 204 78.4
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 4.3e-84 315.1 219 74.0
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 3.6e-83 312.0 219 74.9
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 4.8e-83 311.6 219 74.4
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 4.8e-83 311.6 219 75.3
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 1.1e-82 310.5 219 74.4
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 1.4e-82 310.1 219 74.4
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 2.4e-82 309.3 217 75.6
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 4.0e-82 308.5 216 72.7
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 5.3e-82 308.1 219 71.2
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 5.3e-82 308.1 247 67.2
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 9.0e-82 307.4 219 74.4
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 9.0e-82 307.4 244 68.0
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 3.4e-81 305.4 223 74.4
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 4.5e-81 305.1 214 73.8
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 4.5e-81 305.1 227 70.9
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 4.5e-81 305.1 221 74.2
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 9.9e-81 303.9 216 74.5
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 1.7e-80 303.1 221 72.9
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 1.7e-80 303.1 223 72.6
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 2.9e-80 302.4 216 74.1
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 4.9e-80 301.6 223 70.9
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 8.4e-80 300.8 216 71.3
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 8.4e-80 300.8 223 71.3
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 1.1e-79 300.4 197 75.1
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 2.4e-79 299.3 219 69.9
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 3.2e-79 298.9 223 72.2
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 3.2e-79 298.9 227 70.5
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 4.2e-79 298.5 217 72.4
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 9.3e-79 297.4 221 71.9
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 1.6e-78 296.6 219 70.3
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 1.0e-77 293.9 222 71.6
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 1.3e-77 293.5 215 68.4
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 2.3e-77 292.7 219 69.9
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 3.0e-77 292.4 216 71.3
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 1.1e-76 290.4 216 69.9
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 1.5e-76 290.0 216 69.9
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 4.3e-76 288.5 216 70.4
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 7.4e-76 287.7 216 69.4
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 2.1e-75 286.2 219 68.9
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 2.8e-75 285.8 219 68.5
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 3.6e-75 285.4 219 68.9
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 4.8e-75 285.0 202 73.3
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 1.4e-74 283.5 219 68.9
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 1.8e-74 283.1 223 68.2
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 3.1e-74 282.3 218 65.6
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 5.3e-74 281.6 209 70.3
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 4.5e-73 278.5 216 67.1
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 9.9e-73 277.3 171 81.3
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 1.7e-72 276.6 219 69.9
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 3.8e-72 275.4 167 82.0
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 2.4e-71 272.7 219 67.1
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 2.4e-71 272.7 224 65.2
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 5.5e-71 271.6 167 82.6
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 9.3e-71 270.8 219 63.9
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 1.1e-68 263.8 218 61.5
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 2.5e-68 262.7 207 65.7
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 3.3e-68 262.3 214 66.4
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 3.3e-68 262.3 183 72.1
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 9.6e-68 260.8 214 64.0
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 1.3e-67 260.4 183 73.8
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 6.2e-67 258.1 167 73.7
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 8.1e-67 257.7 227 58.6
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 2.4e-66 256.1 155 82.6
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 9.0e-66 254.2 193 67.4
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 2.2e-64 249.6 179 69.3
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 1.3e-59 233.8 216 61.6
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 5.3e-58 228.4 157 78.3
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 2.9e-56 222.6 226 55.8
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 2.5e-55 219.5 138 75.4
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 7.9e-54 214.5 219 53.0
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 4.1e-50 202.2 141 68.8
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 4.1e-50 202.2 154 71.4
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 5.5e-47 191.8 219 53.0
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 6.7e-45 184.9 136 66.9
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 9.7e-44 181.0 148 70.3
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 1.3e-43 180.6 148 69.6
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 6.7e-29 131.7 95 71.6
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 4.4e-28 129.0 80 82.5
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 4.4e-28 129.0 80 82.5
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 3.2e-23 112.8 69 81.2
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 2.7e-22 109.8 219 37.0
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 8.3e-19 98.2 59 76.3
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 1.0e-13 81.3 73 47.9
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 1.8e-13 80.5 200 33.5
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 1.8e-13 80.5 78 55.1
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 1.5e-12 77.4 157 36.3
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 3.6e-06 56.2 42 64.3


User provided reference genes

Program Settings