Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 1.4e-119 433.0 219 100.0
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 1.2e-78 297.0 188 83.0
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 1.1e-71 273.9 191 77.0
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.2e-62 243.8 193 68.9
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.3e-61 240.4 191 69.1
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 6.7e-61 238.0 189 69.3
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 8.7e-61 237.7 215 62.3
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 6.3e-59 231.5 189 68.3
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 5.3e-58 228.4 187 66.8
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 6.9e-58 228.0 186 66.1
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 3.4e-57 225.7 187 64.7
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 4.2e-55 218.8 192 63.0
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 1.6e-54 216.9 189 62.4
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.6e-54 216.9 188 61.7
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 1.6e-54 216.9 188 61.7
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.6e-54 216.9 216 55.1
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 1.6e-54 216.9 189 61.9
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 3.6e-54 215.7 189 65.1
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.3e-53 213.8 188 61.2
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 8.7e-53 211.1 185 62.2
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 3.3e-52 209.1 191 62.8
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 3.3e-52 209.1 189 63.0
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 4.3e-52 208.8 186 59.1
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 4.3e-52 208.8 187 63.1
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 8.2e-51 204.5 185 62.7
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 1.8e-50 203.4 189 59.8
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 6.9e-50 201.4 220 53.2
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 2.0e-49 199.9 220 53.6
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 1.7e-48 196.8 153 66.7
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 2.9e-48 196.1 217 52.5
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 1.4e-47 193.7 216 51.9
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 3.2e-47 192.6 218 53.2
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.2e-46 190.7 216 53.2
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 6.1e-46 188.3 217 56.2
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 6.1e-46 188.3 187 57.8
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 7.9e-46 188.0 158 63.3
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 1.0e-45 187.6 200 55.0
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 1.4e-45 187.2 187 56.1
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 1.8e-45 186.8 149 62.4
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 1.8e-45 186.8 212 51.9
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 5.1e-45 185.3 216 51.9
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 2.0e-44 183.3 151 58.9
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 2.0e-44 183.3 191 53.4
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 2.6e-44 183.0 214 48.6
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 5.7e-44 181.8 210 50.0
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 5.7e-44 181.8 153 63.4
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 2.8e-43 179.5 199 52.3
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 3.7e-43 179.1 192 53.6
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 1.1e-42 177.6 171 56.1
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.1e-42 177.6 156 59.0
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 1.1e-42 177.6 210 50.5
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 3.1e-42 176.0 189 54.5
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 4.1e-42 175.6 151 60.9
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 6.9e-42 174.9 140 61.4
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 9.1e-42 174.5 147 59.9
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.2e-41 174.1 196 52.0
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 2.0e-41 173.3 142 63.4
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 2.6e-41 172.9 184 51.6
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 5.9e-41 171.8 149 60.4
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 5.9e-41 171.8 195 51.8
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 5.9e-41 171.8 210 48.1
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 1.0e-40 171.0 210 48.1
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 1.3e-40 170.6 140 61.4
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 1.3e-40 170.6 140 61.4
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 2.2e-40 169.9 182 56.0
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 2.9e-40 169.5 207 47.8
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 5.0e-40 168.7 140 59.3
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 5.0e-40 168.7 140 59.3
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 5.0e-40 168.7 140 59.3
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 5.0e-40 168.7 140 59.3
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.4e-39 167.2 116 70.7
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 1.9e-39 166.8 140 59.3
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 7.2e-39 164.9 191 47.6
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 9.4e-39 164.5 164 54.9
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 1.6e-38 163.7 181 55.8
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 1.6e-38 163.7 187 48.7
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 2.1e-38 163.3 173 53.2
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.4e-37 160.6 177 51.4
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 1.5e-36 157.1 204 47.5
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 1.3e-35 154.1 224 40.6
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 3.7e-35 152.5 149 53.7
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 5.3e-34 148.7 197 45.7
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 9.1e-34 147.9 173 49.7
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.0e-32 144.4 190 48.4
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.7e-32 143.7 157 54.1
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 1.5e-31 140.6 96 68.8
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.2e-30 137.5 196 43.4
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 6.1e-30 135.2 195 46.7
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.0e-29 134.4 114 59.6
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 1.8e-29 133.7 96 67.7
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 7.5e-28 128.3 144 50.0
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 1.0e-24 117.9 200 40.5
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 5.5e-23 112.1 101 62.4
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 7.5e-20 101.7 142 45.1
FAN15G1408 Fragaria x ananassa HOM05D007388 ORTHO05D009421 5.4e-18 95.5 97 67.0
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 8.5e-16 88.2 171 34.5
Haze_18114 Corylus avellana HOM05D007388 ORTHO05D009421 2.1e-14 83.6 90 61.1
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 8.0e-14 81.6 154 35.7
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 8.0e-14 81.6 194 32.0
QL07p047550 Quercus lobata HOM05D007388 ORTHO05D009421 9.8e-12 74.7 89 53.9
QL11p041786 Quercus lobata HOM05D007388 ORTHO05D009421 2.8e-11 73.2 89 52.8
QL11p041555 Quercus lobata HOM05D007388 ORTHO05D009421 3.7e-11 72.8 89 52.8
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 8.3e-11 71.6 184 31.0
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 4.5e-09 65.9 96 36.5
Mapoly0007s0106 Marchantia polymorpha HOM05D007480 ORTHO05D009460 6.1e-06 55.5 94 35.1


User provided reference genes

Program Settings