Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 4.9e-58 227.6 119 100.0
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 4.6e-48 194.5 119 85.7
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 3.0e-47 191.8 119 83.2
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 3.0e-47 191.8 117 84.6
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 8.7e-47 190.3 119 84.9
Haze_18297 Corylus avellana HOM05D007692 ORTHO05D009696 3.7e-37 158.3 110 73.6
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 2.4e-36 155.6 118 70.3
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 1.0e-34 150.2 118 68.6
CiPaw.15G091700 Carya illinoinensis HOM05D007692 ORTHO05D009696 1.7e-34 149.4 120 67.5
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 4.9e-34 147.9 112 73.2
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 8.4e-34 147.1 104 75.0
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 8.4e-34 147.1 108 71.3
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 1.4e-33 146.4 104 74.0
Cfa017868 Carpinus fangiana HOM05D007692 ORTHO05D009696 5.5e-33 144.4 110 69.1
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 5.5e-33 144.4 112 70.5
Hma1.2p1_0278F.1_g111850 Hydrangea macrophylla HOM05D007692 ORTHO05D009696 1.0e-31 140.2 107 72.0
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 1.0e-31 140.2 104 72.1
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 1.3e-31 139.8 108 67.6
COL.COLO4_21142 Corchorus olitorius HOM05D007692 ORTHO05D009696 6.7e-31 137.5 105 67.6
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 1.9e-30 136.0 113 68.1
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 4.3e-30 134.8 109 68.8
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 1.3e-29 133.3 106 66.0
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 1.3e-29 133.3 106 66.0
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 1.3e-29 133.3 106 66.0
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 1.6e-29 132.9 106 65.1
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 2.8e-29 132.1 105 65.7
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 6.2e-29 131.0 107 68.2
arahy.Tifrunner.gnm1.ann1.0E4SK3 Arachis hypogaea HOM05D007692 ORTHO05D009696 8.2e-29 130.6 110 63.6
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 8.2e-29 130.6 106 65.1
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 3.1e-28 128.6 116 59.5
Gohir.A05G038600 Gossypium hirsutum HOM05D007692 ORTHO05D009696 5.3e-28 127.9 102 65.7
Lj5g0021751 Lotus japonicus HOM05D007692 ORTHO05D009696 5.3e-28 127.9 113 62.8
Gohir.D05G040100 Gossypium hirsutum HOM05D007692 ORTHO05D009696 6.9e-28 127.5 103 66.0
Gorai.009G040500 Gossypium raimondii HOM05D007692 ORTHO05D009696 6.9e-28 127.5 103 66.0
Nitab4.5_0000446g0120 Nicotiana tabacum HOM05D007692 ORTHO05D009696 6.9e-28 127.5 106 62.3
Medtr1g015470 Medicago truncatula HOM05D007692 ORTHO05D009696 1.5e-27 126.3 113 61.1
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 1.0e-26 123.6 116 57.8
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 1.0e-26 123.6 116 57.8
TPR.G3568 Trifolium pratense HOM05D007692 ORTHO05D009696 1.0e-26 123.6 114 60.5
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 1.7e-26 122.9 109 64.2
TPR.G38893 Trifolium pratense HOM05D007692 ORTHO05D009696 1.7e-26 122.9 108 60.2
Glyma.17G225900 Glycine max HOM05D007692 ORTHO05D009696 2.2e-26 122.5 113 60.2
Eucgr.C00729 Eucalyptus grandis HOM05D007692 ORTHO05D009696 3.8e-26 121.7 112 58.9
Psat6g022960 Pisum sativum HOM05D007692 ORTHO05D009696 3.8e-26 121.7 113 57.5
EL10Ac2g03778 Beta vulgaris HOM05D007692 ORTHO05D009696 5.0e-26 121.3 111 56.8
CSS0041722 Camellia sinensis var. sinensis HOM05D007692 ORTHO05D009696 6.5e-26 120.9 91 69.2
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 1.1e-25 120.2 115 60.0
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 1.1e-25 120.2 109 61.5
PSO541G2080 Papaver somniferum HOM05D007692 ORTHO05D009696 1.4e-25 119.8 100 61.0
VMungo1309G1304 Vigna mungo HOM05D007692 ORTHO05D009696 1.9e-25 119.4 106 61.3
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 3.2e-25 118.6 113 62.8
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 3.2e-25 118.6 113 60.2
Glyma.06G056100 Glycine max HOM05D007692 ORTHO05D009696 5.5e-25 117.9 106 63.2
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 7.2e-25 117.5 107 64.5
PSO675G1902 Papaver somniferum HOM05D007692 ORTHO05D009696 9.3e-25 117.1 100 61.0
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 1.2e-24 116.7 116 56.9
THA.LOC104810956 Tarenaya hassleriana HOM05D007692 ORTHO05D009696 6.1e-24 114.4 111 52.3
Phvul.001G038600 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 2.3e-23 112.5 95 64.2
Phvul.009G082200 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 3.0e-23 112.1 113 57.5
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 6.7e-23 110.9 103 60.2
Medtr3g105090 Medicago truncatula HOM05D007692 ORTHO05D009696 8.7e-23 110.5 113 54.0
Oeu003971.1 Olea europaea HOM05D007692 ORTHO05D009696 1.1e-22 110.2 106 54.7
SalBow4G0926 Salvia bowleyana HOM05D007692 ORTHO05D009696 1.9e-22 109.4 111 50.5
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 2.5e-22 109.0 112 50.9
Psat5g030520 Pisum sativum HOM05D007692 ORTHO05D009696 2.4e-20 102.4 89 60.7
Aqoxy2G03896 Aquilegia oxysepala HOM05D007692 ORTHO05D009696 6.9e-20 100.9 103 54.4
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 6.9e-20 100.9 100 54.0
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-20 100.5 107 51.4
A10p18810 Brassica napus HOM05D007692 ORTHO05D009696 3.4e-19 98.6 112 50.9
BraA10t43961Z Brassica rapa HOM05D007692 ORTHO05D009696 3.4e-19 98.6 112 50.9
Lsat_1_v5_gn_7_58320 Lactuca sativa HOM05D006390 ORTHO05D007899 3.4e-19 98.6 103 52.4
Medtr1g015490 Medicago truncatula HOM05D007692 ORTHO05D009696 3.4e-19 98.6 104 52.9
C09p54830 Brassica napus HOM05D007692 ORTHO05D009696 4.5e-19 98.2 103 52.4
BolC9t58343H Brassica oleracea HOM05D007692 ORTHO05D009696 4.5e-19 98.2 103 52.4
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 7.7e-19 97.4 103 52.4
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 1.0e-18 97.1 106 50.9
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 2.2e-18 95.9 104 51.0
CDE04G2134 Ceratophyllum demersum HOM05D007692 ORTHO05D009696 5.0e-18 94.7 108 50.0
ATR0598G206 Amborella trichopoda HOM05D007692 ORTHO05D009696 6.5e-18 94.4 104 49.0
Thhalv10015977m.g Eutrema salsugineum HOM05D007692 ORTHO05D009696 1.1e-17 93.6 102 51.0
Lalb_Chr11g0063341 Lupinus albus HOM05D007692 ORTHO05D009696 1.1e-17 93.6 107 53.3
CARHR191630 Cardamine hirsuta HOM05D007692 ORTHO05D009696 1.9e-17 92.8 111 45.9
Sc06g0001120 Simmondsia chinensis HOM05D007692 ORTHO05D009696 3.2e-17 92.0 113 46.9
Ah.11g044290 Amaranthus hybridus HOM05D007692 ORTHO05D009696 2.1e-16 89.4 103 48.5
HanXRQChr03g0065641 Helianthus annuus HOM05D007692 ORTHO05D009696 7.9e-16 87.4 113 46.0
Lj1g0020593 Lotus japonicus HOM05D007692 ORTHO05D009696 1.4e-15 86.7 115 52.2
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 1.4e-15 86.7 104 49.0
Cc08_g01120 Coffea canephora HOM05D007692 ORTHO05D009696 1.8e-15 86.3 108 49.1
Atru.chr7.1844 Acer truncatum HOM05D007692 ORTHO05D009696 1.1e-14 83.6 79 63.3
AT5G21910 Arabidopsis thaliana HOM05D007692 ORTHO05D009696 2.0e-14 82.8 112 44.6
Sp6g23280 Schrenkiella parvula HOM05D007692 ORTHO05D009696 2.5e-14 82.4 103 45.6
Carub.0006s1955 Capsella rubella HOM05D007692 ORTHO05D009696 7.4e-14 80.9 112 42.9
Lalb_Chr14g0366461 Lupinus albus HOM05D007692 ORTHO05D009696 2.2e-13 79.3 79 59.5
Psat6g004480 Pisum sativum HOM05D007692 ORTHO05D009696 8.2e-13 77.4 68 57.4
Duzib150G0238 Durio zibethinus HOM05D007692 ORTHO05D009696 3.1e-12 75.5 154 38.3
TAR624G1426 Trochodendron aralioides HOM05D000001 ORTHO05D000003 9.1e-12 73.9 66 62.1
Carub.0005s0963 Capsella rubella HOM05D007692 ORTHO05D009696 4.5e-11 71.6 101 42.6
Sed0007062 Sechium edule HOM05D007692 ORTHO05D009696 1.0e-07 60.5 55 50.9
Ciclev10026763m.g Citrus clementina HOM05D008318 ORTHO05D010481 3.3e-06 55.5 118 38.1


User provided reference genes

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