Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G388300 Prunus persica HOM05D000888 ORTHO05D000740 3.1e-53 211.5 102 100.0
Prupe.1G517200 Prunus persica HOM05D000888 ORTHO05D000740 7.0e-29 130.6 110 60.0
Prupe.1G519100 Prunus persica HOM05D000888 ORTHO05D000740 1.7e-22 109.4 63 74.6
MD15G1130900 Malus domestica HOM05D000888 ORTHO05D000740 3.6e-17 91.7 68 61.8
MD00G1162200 Malus domestica HOM05D000888 ORTHO05D000740 6.1e-17 90.9 72 55.6
FvH4_7g12210 Fragaria vesca HOM05D000888 ORTHO05D000740 3.4e-15 85.1 94 44.7
FvH4_7g12260 Fragaria vesca HOM05D000888 ORTHO05D000740 3.4e-15 85.1 94 44.7
FAN01G3034 Fragaria x ananassa HOM05D000888 ORTHO05D000740 3.4e-15 85.1 94 44.7
FAN10G0782 Fragaria x ananassa HOM05D000888 ORTHO05D000740 3.4e-15 85.1 94 44.7
FAN10G2447 Fragaria x ananassa HOM05D000888 ORTHO05D000740 3.4e-15 85.1 94 44.7
Manes.18G026450 Manihot esculenta HOM05D000888 ORTHO05D000740 1.7e-14 82.8 68 45.6
CSS0020978 Camellia sinensis var. sinensis HOM05D000888 ORTHO05D000740 3.0e-11 72.0 62 41.9
Dinv36014 Davidia involucrata HOM05D000888 ORTHO05D000740 1.9e-10 69.3 67 41.8
Nitab4.5_0002849g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.1e-09 65.9 68 36.8
Migut.D01642 Erythranthe guttata HOM05D000888 ORTHO05D000740 2.8e-09 65.5 100 34.0
Nn1g09566 Nelumbo nucifera HOM05D000888 ORTHO05D000740 4.7e-09 64.7 76 38.2
PGSC0003DMG403024846 Solanum tuberosum HOM05D000888 ORTHO05D000740 4.7e-09 64.7 68 35.3
ATR0796G188 Amborella trichopoda HOM05D000823 ORTHO05D000088 6.2e-09 64.3 88 40.9
Nitab4.5_0003237g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 6.2e-09 64.3 68 35.3
Migut.D01639 Erythranthe guttata HOM05D000888 ORTHO05D000740 1.1e-08 63.5 66 36.4
Sopen04g026790 Solanum pennellii HOM05D000888 ORTHO05D000740 1.1e-08 63.5 68 35.3
CAN.G32.2 Capsicum annuum HOM05D000888 ORTHO05D000740 1.4e-08 63.2 68 35.3
Solyc04g064830.4 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.4e-08 63.2 69 34.8
TAR628G1487 Trochodendron aralioides HOM05D000823 ORTHO05D000088 2.3e-08 62.4 81 40.7
Prupe.1G489700 Prunus persica HOM05D000888 ORTHO05D000740 6.8e-08 60.8 52 50.0
SalBow8G3609 Salvia bowleyana HOM05D000823 ORTHO05D000088 1.5e-07 59.7 70 41.4
SalBow7G1253 Salvia bowleyana HOM05D000888 ORTHO05D000740 3.4e-07 58.5 61 37.7
Aqoxy6G00935 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 4.4e-07 58.2 70 38.6
Prupe.7G144200 Prunus persica HOM05D000395 ORTHO05D000088 4.4e-07 58.2 66 40.9
Peaxi162Scf00016g01343 Petunia axillaris HOM05D000823 ORTHO05D000088 5.8e-07 57.8 71 40.8
SalBow7G4543 Salvia bowleyana HOM05D000823 ORTHO05D000740 5.8e-07 57.8 61 42.6
Hma1.2p1_0023F.1_g015290 Hydrangea macrophylla HOM05D000888 ORTHO05D000740 7.5e-07 57.4 79 32.9
Dinv00373 Davidia involucrata HOM05D000888 ORTHO05D000740 9.8e-07 57.0 75 34.7
Dinv01509 Davidia involucrata HOM05D000888 ORTHO05D000740 9.8e-07 57.0 75 34.7
Prupe.5G157600 Prunus persica HOM05D005797 ORTHO05D006479 1.3e-06 56.6 94 36.2
RcHm_v2.0_Chr7g0224941 Rosa chinensis HOM05D000823 ORTHO05D000088 1.3e-06 56.6 59 45.8
Haze_07281 Corylus avellana HOM05D005797 ORTHO05D006479 2.9e-06 55.5 78 34.6
Migut.D01640 Erythranthe guttata HOM05D000888 ORTHO05D000740 2.9e-06 55.5 76 36.8
MBI16_g26331_MAGBIO Magnolia biondii HOM05D000395 ORTHO05D000088 2.9e-06 55.5 61 37.7
Nn6g34614 Nelumbo nucifera HOM05D000888 ORTHO05D000740 2.9e-06 55.5 61 37.7
Nn8g38649 Nelumbo nucifera HOM05D000888 ORTHO05D000740 2.9e-06 55.5 61 37.7
CANSAT25G0134 Cannabis sativa HOM05D000823 ORTHO05D000088 3.7e-06 55.1 51 49.0
Nitab4.5_0006661g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.7e-06 55.1 102 32.4
SalBow5G2248 Salvia bowleyana HOM05D000823 ORTHO05D000088 3.7e-06 55.1 61 41.0
SalBow6G5296 Salvia bowleyana HOM05D005797 ORTHO05D000088 3.7e-06 55.1 50 52.0
SalBow6G5938 Salvia bowleyana HOM05D005797 ORTHO05D000088 3.7e-06 55.1 50 52.0
Haze_08008 Corylus avellana HOM05D000823 ORTHO05D000088 4.9e-06 54.7 65 43.1
Migut.B00294 Erythranthe guttata HOM05D000823 ORTHO05D000088 6.4e-06 54.3 69 37.7
Migut.B01169 Erythranthe guttata HOM05D000823 ORTHO05D000088 6.4e-06 54.3 62 38.7
QL11p039199 Quercus lobata HOM05D000823 ORTHO05D000088 6.4e-06 54.3 58 43.1
SalBow1G4579 Salvia bowleyana HOM05D005797 ORTHO05D000088 6.4e-06 54.3 70 41.4
Thecc.09G009500 Theobroma cacao HOM05D000888 ORTHO05D000740 6.4e-06 54.3 101 31.7
Actinidia06436 Actinidia chinensis HOM05D000888 ORTHO05D000740 8.3e-06 53.9 71 32.4
Nitab4.5_0002687g0070 Nicotiana tabacum HOM05D000395 ORTHO05D000088 8.3e-06 53.9 58 41.4
Nitab4.5_0008877g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 8.3e-06 53.9 63 39.7
SalBow1G5187 Salvia bowleyana HOM05D005797 ORTHO05D000088 8.3e-06 53.9 50 50.0
HPP92_019639 Vanilla planifolia HOM05D000395 ORTHO05D000088 8.3e-06 53.9 56 41.1


User provided reference genes

Program Settings