Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 4.9e-246 854.0 419 100.0
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 1.8e-187 659.4 422 79.6
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 2.2e-177 625.9 416 73.8
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 3.0e-171 605.5 416 71.9
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 8.3e-169 597.4 424 70.8
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 3.3e-165 585.5 422 69.0
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.9e-160 569.7 424 65.8
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 3.2e-160 568.9 427 68.1
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 2.7e-159 565.8 418 68.2
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 1.3e-158 563.5 424 66.3
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 1.7e-158 563.1 424 66.7
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 5.0e-158 561.6 425 65.6
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 3.3e-157 558.9 420 67.1
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 3.6e-156 555.4 417 66.7
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 5.2e-155 551.6 417 66.2
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 2.0e-154 549.7 417 66.4
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 1.1e-152 543.9 426 63.8
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 4.1e-152 542.0 408 67.6
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 4.1e-152 542.0 540 53.7
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 7.1e-152 541.2 420 66.9
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.7e-150 536.6 412 64.8
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 2.3e-150 536.2 412 64.8
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.6e-148 530.0 416 63.2
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 4.0e-147 525.4 412 63.3
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 5.2e-147 525.0 420 64.3
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 3.2e-144 515.8 474 57.2
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 1.6e-143 513.5 421 61.3
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 1.6e-143 513.5 422 62.1
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 1.3e-142 510.4 426 60.8
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 8.6e-142 507.7 427 61.4
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 5.6e-141 505.0 399 63.2
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 7.3e-141 504.6 417 58.8
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 1.2e-140 503.8 418 60.5
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 3.6e-140 502.3 430 59.3
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 3.1e-139 499.2 446 58.3
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 6.9e-139 498.0 422 60.7
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 9.0e-139 497.7 426 61.3
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 2.2e-137 493.0 431 58.5
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 2.2e-137 493.0 436 59.4
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 2.2e-137 493.0 419 60.1
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 6.4e-137 491.5 439 59.5
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 1.4e-136 490.3 427 59.5
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.9e-136 490.0 426 60.3
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 3.2e-136 489.2 423 59.6
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 3.2e-136 489.2 428 59.1
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 2.1e-135 486.5 429 58.0
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 2.3e-134 483.0 415 60.0
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 3.0e-134 482.6 425 59.1
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 5.1e-134 481.9 376 67.6
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 4.3e-133 478.8 431 57.8
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 5.6e-133 478.4 417 57.8
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 5.6e-133 478.4 420 58.8
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 1.6e-132 476.9 416 58.4
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 4.8e-132 475.3 422 58.8
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 6.2e-132 474.9 428 57.9
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 1.1e-131 474.2 419 59.7
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.4e-131 473.0 375 63.2
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 4.0e-131 472.2 412 59.0
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.0e-131 472.2 451 57.9
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.0e-131 472.2 451 57.9
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 6.9e-131 471.5 449 55.5
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 6.9e-131 471.5 427 56.4
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 5.8e-130 468.4 415 58.6
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 7.6e-130 468.0 424 56.8
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 1.3e-129 467.2 415 58.1
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 1.7e-129 466.8 415 58.1
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 4.2e-128 462.2 421 57.5
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 4.2e-128 462.2 419 58.2
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 4.2e-128 462.2 418 56.2
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 4.2e-128 462.2 416 58.7
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 1.0e-126 457.6 435 53.8
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 6.7e-126 454.9 378 61.9
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 6.7e-126 454.9 414 57.2
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 2.1e-124 449.9 416 55.8
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 5.3e-123 445.3 413 55.9
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 2.6e-122 443.0 419 56.3
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 2.1e-119 433.3 418 53.3
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 5.1e-118 428.7 424 53.3
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 6.2e-116 421.8 381 57.2
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 4.9e-113 412.1 350 59.4
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 1.1e-112 411.0 401 54.1
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 2.2e-108 396.7 365 56.7
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 4.1e-107 392.5 433 50.3
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 9.0e-107 391.3 441 50.6
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 4.5e-106 389.0 419 47.7
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 8.5e-105 384.8 339 61.1
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 8.5e-105 384.8 358 57.8
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 1.1e-104 384.4 349 56.7
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 4.2e-104 382.5 369 54.5
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 2.7e-103 379.8 450 47.8
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 4.6e-103 379.0 417 47.5
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.5e-88 330.1 405 45.9
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.6e-87 327.4 351 51.0
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.0e-86 324.7 428 43.0
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 4.4e-85 319.3 440 40.7
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 3.1e-83 313.2 364 44.8
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 8.8e-78 295.0 291 48.5
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 5.9e-66 255.8 335 44.5
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 3.4e-61 240.0 223 57.8
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 1.7e-60 237.7 160 68.8
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 3.6e-55 219.9 232 53.4
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 3.7e-52 209.9 190 50.5
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 4.3e-48 196.4 165 53.9
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 4.0e-46 189.9 166 65.1
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 7.0e-43 179.1 222 43.2
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 2.8e-31 140.6 160 50.6
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 2.9e-28 130.6 168 48.8
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 1.7e-25 121.3 80 68.8
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 6.2e-15 86.3 239 27.2
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 6.2e-15 86.3 92 51.1
Prupe.1G388100 Prunus persica HOM05D000823 ORTHO05D000088 3.4e-13 80.5 51 80.4
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 6.4e-12 76.3 99 49.5
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.3e-09 67.8 50 64.0


User provided reference genes

Program Settings