Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 3.5e-211 738.0 368 100.0
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.6e-187 659.4 363 86.2
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.7e-187 658.7 363 86.2
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-185 653.3 362 85.6
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 7.3e-185 650.6 363 85.4
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 9.9e-166 587.0 338 82.8
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 2.1e-163 579.3 336 82.4
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 7.8e-163 577.4 340 80.6
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 2.3e-162 575.9 339 81.7
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 3.9e-162 575.1 335 81.8
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 9.5e-161 570.5 336 80.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 1.6e-160 569.7 335 80.9
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.3e-157 560.1 335 78.5
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 8.4e-157 557.4 336 78.6
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.2e-155 553.5 334 80.2
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.3e-154 550.1 335 79.7
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.3e-153 545.4 326 79.4
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 5.6e-153 544.7 334 79.0
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 9.6e-153 543.9 332 78.6
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 2.4e-151 539.3 333 77.2
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.2e-150 537.0 361 72.9
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.5e-150 536.6 336 76.8
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.8e-149 531.9 331 76.4
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 3.8e-149 531.9 335 76.1
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 8.4e-149 530.8 336 74.7
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.4e-148 530.0 335 74.9
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 4.2e-148 528.5 334 74.9
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 5.4e-148 528.1 334 78.4
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.2e-147 526.9 336 76.5
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.7e-147 525.8 329 75.1
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 7.8e-147 524.2 336 74.7
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 2.3e-146 522.7 336 75.0
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 6.6e-146 521.2 334 74.0
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.1e-145 520.4 332 77.1
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.1e-145 520.4 336 74.1
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.5e-145 519.2 323 75.5
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 2.5e-145 519.2 324 75.9
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 3.3e-145 518.8 332 74.7
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 7.3e-145 517.7 323 75.5
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 7.3e-145 517.7 336 74.4
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.6e-144 516.5 331 75.5
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.6e-144 516.5 335 72.2
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 6.2e-144 514.6 327 74.3
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 2.4e-143 512.7 335 73.1
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 2.4e-143 512.7 324 75.0
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 4.0e-143 511.9 324 74.7
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.0e-142 509.6 334 73.4
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 3.4e-142 508.8 337 74.8
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 7.6e-142 507.7 334 72.8
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 4.9e-141 505.0 333 73.3
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 4.9e-141 505.0 321 73.8
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 6.4e-141 504.6 336 70.8
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 6.4e-141 504.6 334 73.1
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.4e-140 503.4 309 77.7
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 6.0e-139 498.0 326 72.7
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 3.0e-138 495.7 337 70.9
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 5.1e-138 495.0 331 71.6
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.1e-137 493.8 333 71.5
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 3.3e-137 492.3 352 67.0
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 2.1e-136 489.6 334 69.8
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 2.1e-136 489.6 336 70.8
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.2e-136 488.0 331 71.3
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.1e-135 487.3 336 71.4
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.8e-135 486.5 331 70.7
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.4e-135 486.1 331 71.0
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.4e-134 482.3 343 67.9
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 4.5e-134 481.9 341 68.6
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 9.9e-134 480.7 322 71.1
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 9.9e-134 480.7 322 71.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 9.9e-134 480.7 322 71.1
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 4.9e-133 478.4 322 71.1
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 4.9e-133 478.4 334 74.0
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 8.4e-133 477.6 335 68.4
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.1e-132 477.2 350 66.9
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.4e-132 476.9 322 70.5
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.4e-132 476.9 322 70.5
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 2.4e-132 476.1 323 69.7
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 3.2e-132 475.7 350 66.3
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 5.5e-132 474.9 331 69.5
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 9.3e-132 474.2 330 68.5
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 4.3e-129 465.3 335 67.2
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 5.6e-129 464.9 332 67.8
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.5e-126 456.8 321 69.2
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.2e-125 453.0 324 66.7
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.4e-124 450.3 335 66.0
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.9e-124 449.9 336 65.2
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 5.7e-121 438.3 317 66.9
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 1.4e-116 423.7 336 63.4
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.2e-116 421.4 337 63.2
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.0e-106 391.0 308 63.6
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 8.2e-104 381.3 313 59.4
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 3.4e-102 375.9 319 60.2
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.3e-101 374.0 295 63.1
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.4e-97 359.0 208 82.7
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 5.3e-87 325.5 318 52.5
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.2e-86 324.3 247 65.6
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.5e-84 316.6 215 72.1
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 7.2e-84 315.1 309 52.1
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.4e-82 310.8 203 72.4
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.4e-81 305.8 305 51.1
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.7e-75 285.8 162 83.3
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 2.4e-71 273.5 205 64.9
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.6e-68 262.3 134 91.0
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 4.7e-67 259.2 177 68.9
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.2e-64 250.4 163 72.4
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.2e-62 244.6 256 52.3
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.0e-57 227.3 156 71.2
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.9e-53 213.0 284 44.4
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.2e-49 201.4 130 76.2
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.7e-48 197.6 139 67.6
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 1.3e-45 188.0 91 93.4
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.3e-44 182.2 144 62.5
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.6e-30 136.3 147 49.7
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.7e-29 132.1 135 49.6
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 4.3e-20 103.2 282 31.6
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.7e-19 100.1 72 68.1
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 5.1e-13 79.7 70 58.6
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 1.6e-11 74.7 175 29.7
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 7.6e-09 65.9 178 28.1


User provided reference genes

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