Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 1.4e-196 689.5 375 100.0
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 1.6e-70 270.8 383 49.1
MD15G1011900 Malus domestica HOM05D015458 ORTHO05D008337 3.3e-44 183.3 349 39.3
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 1.3e-24 118.2 351 35.3
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 5.0e-24 116.3 353 33.4
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 7.2e-23 112.5 353 32.9
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 2.1e-22 110.9 353 33.1
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 8.0e-22 109.0 355 34.1
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 1.8e-21 107.8 186 42.5
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.1e-18 98.6 352 33.0
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 2.4e-18 97.4 372 28.5
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 7.0e-18 95.9 166 41.0
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 9.2e-18 95.5 356 30.3
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 1.7e-16 91.3 184 40.2
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 2.9e-16 90.5 358 29.6
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 1.9e-15 87.8 355 27.9
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 7.3e-15 85.9 207 34.8
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 1.2e-14 85.1 189 34.9
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.6e-14 84.7 191 36.1
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 2.1e-14 84.3 166 34.9
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 8.0e-14 82.4 195 34.4
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 2.3e-13 80.9 192 34.4
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 8.9e-13 79.0 361 27.4
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 1.2e-12 78.6 192 34.9
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 1.5e-12 78.2 360 27.8
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 2.0e-12 77.8 183 37.2
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 3.4e-12 77.0 346 30.6
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 7.5e-12 75.9 358 27.4
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 9.8e-12 75.5 346 28.0
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 9.8e-12 75.5 360 28.6
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 9.8e-12 75.5 119 38.7
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 9.8e-12 75.5 170 36.5
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 1.3e-11 75.1 175 33.7
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 2.2e-11 74.3 348 27.6
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 8.3e-11 72.4 189 31.2
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 8.3e-11 72.4 118 43.2
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 1.1e-10 72.0 80 48.8
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 1.4e-10 71.6 347 28.8
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 1.4e-10 71.6 357 28.6
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.4e-10 71.6 196 31.6
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.4e-10 71.6 204 31.4
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 5.4e-10 69.7 189 32.8
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 7.0e-10 69.3 167 34.7
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 9.2e-10 68.9 172 35.5
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 9.2e-10 68.9 198 31.3
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 1.2e-09 68.6 178 33.7
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 1.2e-09 68.6 177 31.1
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 1.6e-09 68.2 349 29.2
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 6.0e-09 66.2 258 29.8
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 6.0e-09 66.2 195 30.3
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 7.8e-09 65.9 175 31.4
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 1.3e-08 65.1 209 31.6
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 1.3e-08 65.1 356 26.7
Atru.chr13.288 Acer truncatum HOM05D007760 ORTHO05D008337 1.7e-08 64.7 187 34.2
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 1.7e-08 64.7 190 31.6
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 1.7e-08 64.7 158 33.5
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 2.3e-08 64.3 181 33.7
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 3.0e-08 63.9 191 31.9
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 5.0e-08 63.2 198 29.8
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 6.6e-08 62.8 175 32.0
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.1e-07 62.0 181 31.5
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.1e-07 62.0 392 26.3
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 1.1e-07 62.0 168 32.1
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 1.1e-07 62.0 195 29.7
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 1.5e-07 61.6 188 30.9
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.9e-07 61.2 181 30.9
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 1.9e-07 61.2 79 40.5
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.9e-07 61.2 192 30.7
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 2.5e-07 60.8 176 31.8
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.5e-07 60.8 192 30.7
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 2.5e-07 60.8 156 34.0
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 3.3e-07 60.5 82 39.0
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 4.3e-07 60.1 187 29.9
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 4.3e-07 60.1 176 31.8
GSVIVG01009911001 Vitis vinifera HOM05D007760 ORTHO05D008337 4.3e-07 60.1 160 33.8
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 5.6e-07 59.7 169 30.8
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 7.3e-07 59.3 182 31.3
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 7.3e-07 59.3 171 33.3
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 9.5e-07 58.9 92 42.4
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.2e-06 58.5 178 31.5
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 1.2e-06 58.5 165 33.3
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 2.1e-06 57.8 69 50.7
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.1e-06 57.8 176 31.2
Psat6g002840 Pisum sativum HOM05D007760 ORTHO05D008337 2.8e-06 57.4 84 42.9
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 6.2e-06 56.2 182 28.6


User provided reference genes

Program Settings